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The map label for this gene is 39995156

Identifier: 39995156

GI number: 39995156

Start: 60303

End: 61211

Strand: Reverse

Name: 39995156

Synonym: GSU0045

Alternate gene names: NA

Gene position: 61211-60303 (Counterclockwise)

Preceding gene: 39995166

Following gene: 39995155

Centisome position: 1.6

GC content: 44.22

Gene sequence:

>909_bases
ATGGGTCAATTTTCGATTTCCGAAGTGGGTCATTTTTACATTGCCGCTAACACCTATTTCTATCATCCTGACCATTTGGG
TGGTGTGAGCGCGGTGACCAACGGTTCCGGGCAGGTGGTCAGCAGCACCAGCTATCTCCCCTTCGGCGAGGTCAGGCAAG
GCGGCACAGAGAATTATTACACCGGCAAGGAAAACGACAAGGGGGCAGGGTTATACAACTTCGAGGCGCGCTACGTCAGC
CCGGAACTGCGGCACTTCACCCAGGCGGATGTCGAGGAGCCCGATCTGGATGATCCGCAGGATCTGAACCTGTATGCGTA
CGCGGGGAACAATCCGCTCAGTTATGTTGACCTGGATGGCTACAAGAAGAAAAAGAAGGCAAAGCTGTCAAAGAGAGAAA
AATGGATGATCGCCCATGGGGTTGATCCGGATCATGACAAGACACCGCTGAAGAAGGCGAAGAAGCTGTTTAAGGAGGGG
AAGAAGTATCAAGTCGCAAAAAATATTTCTCGAACCAAAACACAAAGCAACCGAATGAAAGCCACAAACAATGCAGCACA
TGAAACTGAATCTTTAACAAACAATCAAGTCCCAAGTGACAATAATATTGATGTTAATCATCTACCAGACACTTCTGTGT
TTATTGGTGAATATGATAACAGCCTAGATAAATGCGTTGAAGAATCTGATGATTTATTGTCAGCTGTAGAGAATCTGCCT
GGTATAGGTGATTCAGTAACTGGATTAAAAATTATTGAATTCATTAAAAACGGTGATTACGCTAGCGCATCACAAGCATT
AACTGAATATGCTGCTGATAAATTAACTCTTACCTATGAGGTAATATCAAAACTAAGGTTTATATATATCCAAATCAGAT
GTGGCTTGTTTGGACATAAAGCCGGATAA

Upstream 100 bases:

>100_bases
CTCCCGGATGCTCTTGCCCTGCTTCTTGAGAATTCTGACTTCCATACACTCTTCCTTTCCGATCATGCCGACCCTCCAGG
TCGGCTAGGATAGAGGAAGA

Downstream 100 bases:

>100_bases
ATTCATTTAAATGGAGAATGTTTAATGTTCTGTGAGGCGTATAAATATATTCGGGCCACTATAATCGGGCTGGTGTATTT
AATGGCCATATTTTGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; YD Repeat-/RHS Repeat-Containing Protein; NHL/RHS/YD Repeat-Containing Protein; Integrins Alpha Chain; RHS Repeat Family

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MGQFSISEVGHFYIAANTYFYHPDHLGGVSAVTNGSGQVVSSTSYLPFGEVRQGGTENYYTGKENDKGAGLYNFEARYVS
PELRHFTQADVEEPDLDDPQDLNLYAYAGNNPLSYVDLDGYKKKKKAKLSKREKWMIAHGVDPDHDKTPLKKAKKLFKEG
KKYQVAKNISRTKTQSNRMKATNNAAHETESLTNNQVPSDNNIDVNHLPDTSVFIGEYDNSLDKCVEESDDLLSAVENLP
GIGDSVTGLKIIEFIKNGDYASASQALTEYAADKLTLTYEVISKLRFIYIQIRCGLFGHKAG

Sequences:

>Translated_302_residues
MGQFSISEVGHFYIAANTYFYHPDHLGGVSAVTNGSGQVVSSTSYLPFGEVRQGGTENYYTGKENDKGAGLYNFEARYVS
PELRHFTQADVEEPDLDDPQDLNLYAYAGNNPLSYVDLDGYKKKKKAKLSKREKWMIAHGVDPDHDKTPLKKAKKLFKEG
KKYQVAKNISRTKTQSNRMKATNNAAHETESLTNNQVPSDNNIDVNHLPDTSVFIGEYDNSLDKCVEESDDLLSAVENLP
GIGDSVTGLKIIEFIKNGDYASASQALTEYAADKLTLTYEVISKLRFIYIQIRCGLFGHKAG
>Mature_301_residues
GQFSISEVGHFYIAANTYFYHPDHLGGVSAVTNGSGQVVSSTSYLPFGEVRQGGTENYYTGKENDKGAGLYNFEARYVSP
ELRHFTQADVEEPDLDDPQDLNLYAYAGNNPLSYVDLDGYKKKKKAKLSKREKWMIAHGVDPDHDKTPLKKAKKLFKEGK
KYQVAKNISRTKTQSNRMKATNNAAHETESLTNNQVPSDNNIDVNHLPDTSVFIGEYDNSLDKCVEESDDLLSAVENLPG
IGDSVTGLKIIEFIKNGDYASASQALTEYAADKLTLTYEVISKLRFIYIQIRCGLFGHKAG

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33574; Mature: 33442

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQFSISEVGHFYIAANTYFYHPDHLGGVSAVTNGSGQVVSSTSYLPFGEVRQGGTENYY
CCCCCCCCCCEEEEEECEEEECCCCCCCCCEEECCCCCEEECCCCCCCHHHHCCCCCCCC
TGKENDKGAGLYNFEARYVSPELRHFTQADVEEPDLDDPQDLNLYAYAGNNPLSYVDLDG
CCCCCCCCCCEEECEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCC
YKKKKKAKLSKREKWMIAHGVDPDHDKTPLKKAKKLFKEGKKYQVAKNISRTKTQSNRMK
CHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ATNNAAHETESLTNNQVPSDNNIDVNHLPDTSVFIGEYDNSLDKCVEESDDLLSAVENLP
CCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
GIGDSVTGLKIIEFIKNGDYASASQALTEYAADKLTLTYEVISKLRFIYIQIRCGLFGHK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHHHEEEEEEEEECCCCCC
AG
CC
>Mature Secondary Structure 
GQFSISEVGHFYIAANTYFYHPDHLGGVSAVTNGSGQVVSSTSYLPFGEVRQGGTENYY
CCCCCCCCCEEEEEECEEEECCCCCCCCCEEECCCCCEEECCCCCCCHHHHCCCCCCCC
TGKENDKGAGLYNFEARYVSPELRHFTQADVEEPDLDDPQDLNLYAYAGNNPLSYVDLDG
CCCCCCCCCCEEECEEEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCC
YKKKKKAKLSKREKWMIAHGVDPDHDKTPLKKAKKLFKEGKKYQVAKNISRTKTQSNRMK
CHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ATNNAAHETESLTNNQVPSDNNIDVNHLPDTSVFIGEYDNSLDKCVEESDDLLSAVENLP
CCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
GIGDSVTGLKIIEFIKNGDYASASQALTEYAADKLTLTYEVISKLRFIYIQIRCGLFGHK
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHHHEEEEEEEEECCCCCC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA