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The map label for this gene is yoqW [H]

Identifier: 39995151

GI number: 39995151

Start: 50370

End: 51041

Strand: Direct

Name: yoqW [H]

Synonym: GSU0040

Alternate gene names: 39995151

Gene position: 50370-51041 (Clockwise)

Preceding gene: 39995150

Following gene: 39995152

Centisome position: 1.32

GC content: 65.48

Gene sequence:

>672_bases
ATGTGCGGCCGATTCACCCTCACGCTCCCGCCTGACCTGCTGGCCGAGATCATCGGCGAGATCGAGGCTGCCCGCGTCCA
GCCACGGTACAATATCGCTCCGGCCCAGGAGGTGGCAGTGGTCCGCCAGGATGCCGGCGGCCGGCGCCATCTGGACTACC
TCCGCTGGGGCCTGATTCCCCCGTGGGCCAAGGATGCCTCCGTGGGCAACCACATGATCAACGCCCGTTCCGAGACAGTG
GCGGAGAAGCCTGCCTTCCGCCACGCTTTCCGCTCCCGGCGCTGTCTCGTGCTCGCCTCGGGCTTCTACGAATGGAAGGC
CGAAGGGAACCGCAAACAGCCCCTCTATATCCACATGAAGGACGGCGGCCCCATGGTCTTTGCCGGGCTCTGGGAAAGCT
GGAAATCCCCTGAGGGGGCAATCGTCGAATCCTGCACCATCCTCACCACGTACAGCAACAGCCTCATCCGCCCTCTCCAC
GACCGGATGCCCGTGATCCTCGGCCGCAGCGACTGGGACATCTGGCTGTCCCGCGAGGCGACCAGTGAGGAGCTTACCCC
GCTCTTCCAGCCGTACCCCTCGGACCTTCTCGCCATGTACCCCGTGGGAACCGGCGTGAACAGCCCGCGCAACGACTCGC
CGGACCTTCTCGAACCCCTGAACGAGCCGTAA

Upstream 100 bases:

>100_bases
CGGTCCTCAACATCGCTGGACCGCGGGAATCTAAATTTCCCGGTATTCAAGAGAAAGCACTGGCGTTTCTCCGCGAAGTC
TTCGCAGAAAGTTAATCACC

Downstream 100 bases:

>100_bases
CCCCCGCCCTGGCGGACGTAGATCGAGCGCCCTTGACAGGTCGCCTGTACGGTGATAGGTTGTCACATGTATACCATGAC
TGATGACAACCCGGAGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MCGRFTLTLPPDLLAEIIGEIEAARVQPRYNIAPAQEVAVVRQDAGGRRHLDYLRWGLIPPWAKDASVGNHMINARSETV
AEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWESWKSPEGAIVESCTILTTYSNSLIRPLH
DRMPVILGRSDWDIWLSREATSEELTPLFQPYPSDLLAMYPVGTGVNSPRNDSPDLLEPLNEP

Sequences:

>Translated_223_residues
MCGRFTLTLPPDLLAEIIGEIEAARVQPRYNIAPAQEVAVVRQDAGGRRHLDYLRWGLIPPWAKDASVGNHMINARSETV
AEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWESWKSPEGAIVESCTILTTYSNSLIRPLH
DRMPVILGRSDWDIWLSREATSEELTPLFQPYPSDLLAMYPVGTGVNSPRNDSPDLLEPLNEP
>Mature_223_residues
MCGRFTLTLPPDLLAEIIGEIEAARVQPRYNIAPAQEVAVVRQDAGGRRHLDYLRWGLIPPWAKDASVGNHMINARSETV
AEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMKDGGPMVFAGLWESWKSPEGAIVESCTILTTYSNSLIRPLH
DRMPVILGRSDWDIWLSREATSEELTPLFQPYPSDLLAMYPVGTGVNSPRNDSPDLLEPLNEP

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=273, Percent_Identity=30.03663003663, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI54607104, Length=273, Percent_Identity=30.03663003663, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI48994894, Length=230, Percent_Identity=30, Blast_Score=100, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6323761, Length=257, Percent_Identity=30.7392996108949, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25110; Mature: 25110

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLTLPPDLLAEIIGEIEAARVQPRYNIAPAQEVAVVRQDAGGRRHLDYLRWGLIP
CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
PWAKDASVGNHMINARSETVAEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMK
CCCCCCCCCHHHHCCCHHHHHHCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCEEEEEC
DGGPMVFAGLWESWKSPEGAIVESCTILTTYSNSLIRPLHDRMPVILGRSDWDIWLSREA
CCCCEEEEECHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHCCCEEEECCCCEEEEECCC
TSEELTPLFQPYPSDLLAMYPVGTGVNSPRNDSPDLLEPLNEP
CCHHCCHHHCCCCCHHEEEEECCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MCGRFTLTLPPDLLAEIIGEIEAARVQPRYNIAPAQEVAVVRQDAGGRRHLDYLRWGLIP
CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCC
PWAKDASVGNHMINARSETVAEKPAFRHAFRSRRCLVLASGFYEWKAEGNRKQPLYIHMK
CCCCCCCCCHHHHCCCHHHHHHCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCEEEEEC
DGGPMVFAGLWESWKSPEGAIVESCTILTTYSNSLIRPLHDRMPVILGRSDWDIWLSREA
CCCCEEEEECHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHCCCEEEECCCCEEEEECCC
TSEELTPLFQPYPSDLLAMYPVGTGVNSPRNDSPDLLEPLNEP
CCHHCCHHHCCCCCHHEEEEECCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]