Click here to switch to the map view.

The map label for this gene is yjeS [H]

Identifier: 39546397

GI number: 39546397

Start: 4597229

End: 4598368

Strand: Reverse

Name: yjeS [H]

Synonym: STM4355.S

Alternate gene names: 39546397

Gene position: 4598368-4597229 (Counterclockwise)

Preceding gene: 16767624

Following gene: 308065945

Centisome position: 94.67

GC content: 54.65

Gene sequence:

>1140_bases
ATGTCAAAGCCCCTCGATCTCAATCAGTTAGCGCAAAATATTAAGCAGTGGGGGCTGGAGCTGGGCTTTCAGCAGGTCGG
TATTACTGATACCGATCTGCGCGCATCCGAACCTGCGCTGCAGGCGTGGCTGGACAAACAATACCACGGCGAGATGGCAT
GGATGGCGCGCCACGGTATGATGCGCGCCCGGCCTCATGAACTCTTACCCGGTACGCTACGTGTCATCAGCGTGCGCATG
AACTATCTGCCCGCCAACGCCGCGTTTGCCAGTACGTTGAAGGATCCCACGCTGGGCTACGTTAGCCGATATGCGCTGGG
GCGTGATTATCACAAGCTATTACGCAGCCGCCTTAAAAAACTGGGCGAGCAGATCCAGCAGTACTGCGGTTCGCTGAATT
TTAGACCGTTTGTCGACTCTGCGCCTATTCTTGAACGCCCATTAGCGGAAAAAGCCGGACTTGGCTGGACGGGTAAGCAC
TCACTTATCCTTAATCGGGAGGCGGGCTCATTCTTTTTCCTGGGGGAATTGCTGATTGATTTACCGCTGCCGGTCGACCA
GCCGGTCGAGGAAGGTTGCGGTAAATGCGTCGCCTGTATGACCATTTGCCCGACCGGGGCGATCGTCGAACCGTATACGG
TGGACGCGCGGCGCTGTATTTCTTATCTCACCATTGAGCTGGAAGGCGCTATTCCGGAAGCATTTCGCCCACTGATAGGT
AACCGTATTTACGGCTGCGATGACTGCCAGCTTATCTGTCCGTGGAATCGTTACTCTCAGTTGACCGACGAAGCAGATTT
TAGCCCACGCAAGGCGCTGCATAATCCAGATTTGCTTGAGTTGTTTAGCTGGAGCGAAGCGCAGTTTCTGAAAGTCACTG
AAGGTTCTGCGATTCGGCGCATTGGTCATTTACGCTGGCTGCGCAATGTTGCCGTCGCGCTGGGGAATGCGCCGTGGAGT
AATGCCGTCATTACGGCGCTGGAAAGCCGCAAGGGTGAGCATCCACTTCTCGATGAGCATATCGAATGGGCGATTGCGCA
ACAAATTGAAAAGCGCAACGCCTGCATCATTGAAGTGCAGCTACCGAAAAAACAGCGTCTGGTCAGGGTGATTGAAAAAG
GGCTGGTGCGCGATGCCTGA

Upstream 100 bases:

>100_bases
GAAGGCATCCGCCGCATCGCGTTCCAGCCGTTTGATGTCATCGGCGGGCCAAATGGAGTGTGGTATACTTACAGGGTTTT
TCTTCATGTTATGGTCCATC

Downstream 100 bases:

>100_bases
ATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGT
TTTGAAATCTTATTTTTTCT

Product: FeS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWLDKQYHGEMAWMARHGMMRARPHELLPGTLRVISVRM
NYLPANAAFASTLKDPTLGYVSRYALGRDYHKLLRSRLKKLGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKH
SLILNREAGSFFFLGELLIDLPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEAFRPLIG
NRIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNPDLLELFSWSEAQFLKVTEGSAIRRIGHLRWLRNVAVALGNAPWS
NAVITALESRKGEHPLLDEHIEWAIAQQIEKRNACIIEVQLPKKQRLVRVIEKGLVRDA

Sequences:

>Translated_379_residues
MSKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWLDKQYHGEMAWMARHGMMRARPHELLPGTLRVISVRM
NYLPANAAFASTLKDPTLGYVSRYALGRDYHKLLRSRLKKLGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKH
SLILNREAGSFFFLGELLIDLPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEAFRPLIG
NRIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNPDLLELFSWSEAQFLKVTEGSAIRRIGHLRWLRNVAVALGNAPWS
NAVITALESRKGEHPLLDEHIEWAIAQQIEKRNACIIEVQLPKKQRLVRVIEKGLVRDA
>Mature_378_residues
SKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWLDKQYHGEMAWMARHGMMRARPHELLPGTLRVISVRMN
YLPANAAFASTLKDPTLGYVSRYALGRDYHKLLRSRLKKLGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKHS
LILNREAGSFFFLGELLIDLPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEAFRPLIGN
RIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNPDLLELFSWSEAQFLKVTEGSAIRRIGHLRWLRNVAVALGNAPWSN
AVITALESRKGEHPLLDEHIEWAIAQQIEKRNACIIEVQLPKKQRLVRVIEKGLVRDA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=379, Percent_Identity=90.2374670184697, Blast_Score=719, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 42748; Mature: 42617

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWLDKQYHGEMAWMARHGM
CCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
MRARPHELLPGTLRVISVRMNYLPANAAFASTLKDPTLGYVSRYALGRDYHKLLRSRLKK
HHCCCHHHCCHHHHHHEEHHHHCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHH
LGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLID
HHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHH
LPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEAFRPLIG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHC
NRIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNPDLLELFSWSEAQFLKVTEGSAIRR
CCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHH
IGHLRWLRNVAVALGNAPWSNAVITALESRKGEHPLLDEHIEWAIAQQIEKRNACIIEVQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
LPKKQRLVRVIEKGLVRDA
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKPLDLNQLAQNIKQWGLELGFQQVGITDTDLRASEPALQAWLDKQYHGEMAWMARHGM
CCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
MRARPHELLPGTLRVISVRMNYLPANAAFASTLKDPTLGYVSRYALGRDYHKLLRSRLKK
HHCCCHHHCCHHHHHHEEHHHHCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHH
LGEQIQQYCGSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLID
HHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHH
LPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEAFRPLIG
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHC
NRIYGCDDCQLICPWNRYSQLTDEADFSPRKALHNPDLLELFSWSEAQFLKVTEGSAIRR
CCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHH
IGHLRWLRNVAVALGNAPWSNAVITALESRKGEHPLLDEHIEWAIAQQIEKRNACIIEVQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEE
LPKKQRLVRVIEKGLVRDA
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]