| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yihV [H]
Identifier: 39546385
GI number: 39546385
Start: 4234819
End: 4235721
Strand: Direct
Name: yihV [H]
Synonym: STM4024.S
Alternate gene names: 39546385
Gene position: 4234819-4235721 (Clockwise)
Preceding gene: 16767274
Following gene: 16767290
Centisome position: 87.18
GC content: 56.7
Gene sequence:
>903_bases ATGACCATGGTTCGTATTGCTTGTGTAGGTATTACCGTGATGGATCGCATCTATTACGTGGAAGGATTACCGACAGAAGG GGGTAAATATGTGGCGAAGCGCTATACGGAAGTGGGCGGCGGGCCTGCGGCGACCGCTGCCGTGGCTGCGGCGAAATTGG GCGCACAGGTGGACTTTATTGGCCGTGTGGGCGATGACGACACCGGAAACAGCCTGCTGGCGGAACTGGAATCCCTGGGG GTAAATACCCGCTATACCCGCCGCTACACGCAGGCCATGTCGTCGCAGTCAGCGATTATGGTGGATGCCAAAGGAGAGCG GATTATCGTTAATTATCCCAGCCCGGATTTATTACCTGACGCCGACTGGCTTAACGACATCGATTTTTCGCAGTGGGATG TGGTGTTGGCGGATGTGCGCTGGCATGACGGCGCAAAACAGGCGTTTACGCTGGCGCGTCAGGCTGGCGTCATGACTGTT CTTGATGGCGATATTACGCCGCAGGATATTAGCGAGCTGGTGGCGTTAAGCGACCACGCCGCCTTCTCCGAGCCAGGGCT GGCACGCCTGACGGGGATGAGCGAAGCCATTGATGCGCTAAAAAAAGCACAAATGCTCACAAATGGACATGTCTATGTCA CGCGAGGCAGTGAAGGCTGCAACTGGTTGGAAAAAGCGGCGGTACGCCACCAACCGGGTTTTACCGTGGAGGTGGTGGAT ACTACTGGCGCGGGCGATGTTTTTCATGGCGCACTGGCATTTGGCCTGGCAAGCGGATACGCCATCGAAGAGGCTGTCAG ATTCGCCAGCGGCGTTGCCGCGCTGAAGTGTACGCGCCCGGGTGGCCGGGCGGGTATCCCTGATTGTGAGCAAACCCGAT CTTTCTTGTCACTTTTTGTATAA
Upstream 100 bases:
>100_bases GTTTGTGATCGTATTTGTAATTTATAGTCAAAAAATTGACAGCCGTCACTTTTTAAACATTTCGTGAAATTAAAATGAGC ACATCGAAAATGCTTGAGGA
Downstream 100 bases:
>100_bases TATGAGCAGTAGGAAGCTTTTAGAGGAATGCTCATGAGTCTTACCGAACTGACCGGTAATCCGCGACACGATCGGCTGTT AATGCTAATTGATGAGCGCG
Product: sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFIGRVGDDDTGNSLLAELESLG VNTRYTRRYTQAMSSQSAIMVDAKGERIIVNYPSPDLLPDADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTV LDGDITPQDISELVALSDHAAFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSEGCNWLEKAAVRHQPGFTVEVVD TTGAGDVFHGALAFGLASGYAIEEAVRFASGVAALKCTRPGGRAGIPDCEQTRSFLSLFV
Sequences:
>Translated_300_residues MTMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFIGRVGDDDTGNSLLAELESLG VNTRYTRRYTQAMSSQSAIMVDAKGERIIVNYPSPDLLPDADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTV LDGDITPQDISELVALSDHAAFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSEGCNWLEKAAVRHQPGFTVEVVD TTGAGDVFHGALAFGLASGYAIEEAVRFASGVAALKCTRPGGRAGIPDCEQTRSFLSLFV >Mature_299_residues TMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFIGRVGDDDTGNSLLAELESLGV NTRYTRRYTQAMSSQSAIMVDAKGERIIVNYPSPDLLPDADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTVL DGDITPQDISELVALSDHAAFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSEGCNWLEKAAVRHQPGFTVEVVDT TGAGDVFHGALAFGLASGYAIEEAVRFASGVAALKCTRPGGRAGIPDCEQTRSFLSLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=295, Percent_Identity=29.4915254237288, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI4557693, Length=305, Percent_Identity=26.5573770491803, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI5670342, Length=305, Percent_Identity=25.5737704918033, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87082343, Length=298, Percent_Identity=85.2348993288591, Blast_Score=513, Evalue=1e-147, Organism=Escherichia coli, GI1790193, Length=299, Percent_Identity=28.4280936454849, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789432, Length=295, Percent_Identity=28.135593220339, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17532905, Length=311, Percent_Identity=31.8327974276527, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24583886, Length=305, Percent_Identity=25.9016393442623, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24662680, Length=298, Percent_Identity=23.8255033557047, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI20128807, Length=303, Percent_Identity=26.4026402640264, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 31984; Mature: 31853
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFI CCEEEEEHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE GRVGDDDTGNSLLAELESLGVNTRYTRRYTQAMSSQSAIMVDAKGERIIVNYPSPDLLPD ECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCC ADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTVLDGDITPQDISELVALSDHA CHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCC AFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSEGCNWLEKAAVRHQPGFTVEVVD CCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEE TTGAGDVFHGALAFGLASGYAIEEAVRFASGVAALKCTRPGGRAGIPDCEQTRSFLSLFV CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TMVRIACVGITVMDRIYYVEGLPTEGGKYVAKRYTEVGGGPAATAAVAAAKLGAQVDFI CEEEEEHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE GRVGDDDTGNSLLAELESLGVNTRYTRRYTQAMSSQSAIMVDAKGERIIVNYPSPDLLPD ECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCC ADWLNDIDFSQWDVVLADVRWHDGAKQAFTLARQAGVMTVLDGDITPQDISELVALSDHA CHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCC AFSEPGLARLTGMSEAIDALKKAQMLTNGHVYVTRGSEGCNWLEKAAVRHQPGFTVEVVD CCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEE TTGAGDVFHGALAFGLASGYAIEEAVRFASGVAALKCTRPGGRAGIPDCEQTRSFLSLFV CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]