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The map label for this gene is yhhS [C]

Identifier: 39546370

GI number: 39546370

Start: 3748223

End: 3749440

Strand: Reverse

Name: yhhS [C]

Synonym: STM3581.S

Alternate gene names: 39546370

Gene position: 3749440-3748223 (Counterclockwise)

Preceding gene: 16766871

Following gene: 16766864

Centisome position: 77.19

GC content: 58.87

Gene sequence:

>1218_bases
ATGCCCGAACCCGTCGCTGAACCGGCGCTAAACGGATTGCGCCTCAATCTGCGTATTGTCTCCATTGTGATGTTTAACTT
TGCCAGCTACCTGACCATCGGCCTGCCGCTCGCCGTCTTGCCCGGCTATGTGCATGATGCGATGGGATTCAGCGCGTTCT
GGGCGGGGCTTATTATCAGCCTGCAATACTTCGCCACTCTGTTAAGCCGTCCCCATGCCGGGCGGTATGCGGATGTATTA
GGGCCGAAAAAAATCGTTGTCTTTGGCTTATGCGGCTGTTTTTTAAGCGGACTCGGCTACCTGCTGGCGGATATCGCCAG
CGCCTGGCCGATGATCAGTTTGTTGCTACTGGGGCTGGGTCGCGTGATTTTAGGGATTGGGCAAAGTTTTGCCGGCACCG
GTTCGACACTGTGGGGCGTCGGCGTCGTCGGGTCGTTGCATATTGGTCGGGTCATCTCCTGGAACGGTATCGTCACCTAC
GGCGCAATGGCGATGGGCGCGCCGCTGGGCGTGCTGTGTTATGCCTGGGGCGGGTTACAGGGACTGGCGCTAACGGTGAT
GGGCGTGGCGCTGTTGGCGGTACTGTTAGCCCTTCCACGTCCGTCGGTGAAGGCGAACAAAGGCAAGCCGCTACCGTTTC
GCGCGGTGCTGGGGCGTGTCTGGCTGTATGGTATGGCGTTGGCGCTGGCCTCGGCAGGGTTTGGCGTCATCGCGACGTTT
ATTACCTTATTTTATGATGCTAAAGGCTGGGATGGCGCCGCTTTTGCGCTCACGTTATTTAGCGTCGCGTTTGTCGGCAC
GCGTTTGCTGTTCCCTAACGGCATCAATCGTTTAGGCGGGTTGAATGTCGCCATGATCTGCTTTGGCGTGGAGATTATTG
GTCTGTTACTGGTGGGAACGGCAGCCATGCCGTGGATGGCAAAAATCGGCGTTTTACTCACGGGGATGGGTTTTTCTCTG
GTCTTTCCGGCGCTGGGCGTGGTGGCCGTCAAAGCCGTGCCGCCGCAGAACCAGGGTGCGGCGCTGGCGACCTATACCGT
CTTTATGGATATGTCTTTGGGGGTTACCGGGCCGCTGGCAGGGCTGGTGATGACCTGGGCGGGCGTGCCGGTGATTTATC
TGGCGGCGGCCGGGCTGGTAGCGATGGCGCTATTGCTGACCTGGCGCTTAAAAAAACGGCCTCCGTCTGCACTGCCGGAG
GCCGCATCATCGTCGTAA

Upstream 100 bases:

>100_bases
GTAGCGGCTGCCCTGATACCGATAATCTGAATCTCACTACTGATTTTCACCGCGCGCCATGATAGAAAAGAAAACATGTT
GTAAAAATGCGGTGATACTC

Downstream 100 bases:

>100_bases
AGGTTACTTAATAACCAACGTATTGATGATGTTTTCAGCCGTGGTTTGCGCTTTTTGCTGATTGTCCGCAGGCAGCGTGA
CCTGAATCGTCAGCAATTGG

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVL
GPKKIVVFGLCGCFLSGLGYLLADIASAWPMISLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
GAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSL
VFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPE
AASSS

Sequences:

>Translated_405_residues
MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVL
GPKKIVVFGLCGCFLSGLGYLLADIASAWPMISLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
GAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSL
VFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPE
AASSS
>Mature_404_residues
PEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVLG
PKKIVVFGLCGCFLSGLGYLLADIASAWPMISLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYG
AMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFI
TLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSLV
FPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPEA
ASSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family

Homologues:

Organism=Escherichia coli, GI87082270, Length=405, Percent_Identity=90.8641975308642, Blast_Score=715, Evalue=0.0,
Organism=Escherichia coli, GI1788662, Length=372, Percent_Identity=42.2043010752688, Blast_Score=231, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3404_SALEP (B5R3Y2)

Other databases:

- EMBL:   AM933172
- RefSeq:   YP_002245470.1
- ProteinModelPortal:   B5R3Y2
- GeneID:   6948266
- GenomeReviews:   AM933172_GR
- KEGG:   set:SEN3404
- HOGENOM:   HBG299639
- OMA:   CAFVGAR
- ProtClustDB:   PRK05122
- HAMAP:   MF_01118
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 42083; Mature: 41952

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11dd14bc)-; HASH(0x1244be08)-; HASH(0x10d7ae80)-; HASH(0x124c1de4)-; HASH(0x124658e0)-; HASH(0x116ddafc)-; HASH(0x11dbb394)-; HASH(0x1144abec)-; HASH(0x11ec1800)-; HASH(0x10c124a8)-; HASH(0x11dacbf4)-; HASH(0x1144c7d8)-; HASH(0x11f0f608)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure 
PEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIIS
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQYFATLLSRPHAGRYADVLGPKKIVVFGLCGCFLSGLGYLLADIASAWPMISLLLLGLG
HHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYAWGGLQ
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCHHHHHHHHCCHH
GLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
AAMPWMAKIGVLLTGMGFSLVFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHEEEECCCCCCHHHH
GLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPEAASSS
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA