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The map label for this gene is yhbV [H]

Identifier: 39546363

GI number: 39546363

Start: 3441277

End: 3442155

Strand: Direct

Name: yhbV [H]

Synonym: STM3275.S

Alternate gene names: 39546363

Gene position: 3441277-3442155 (Clockwise)

Preceding gene: 16766572

Following gene: 16766574

Centisome position: 70.85

GC content: 56.43

Gene sequence:

>879_bases
ATGAAATATTCCTTAGGACCGGTGCTTTATTACTGGCCGAAAGAGACGCTGGAAGATTTTTATCAGCAGGCCGCAAAAAG
CAGCGCTGATGTCATTTATCTGGGCGAAGCGGTGTGCAGCAAGCGTCGCGCGACCAAAGTCGGCGACTGGCTGGAAATGG
CGAAATCCCTCGCCGCCAGCGGTAAGCAGGTGGTGCTCTCCACCCTGGCGCTGGTACAGGCGTCATCTGAATTAAGCGAG
CTGAAACGCTATGTGGACAACGGCGATTTTCTGCTGGAAGCCAGCGATCTTGGCGTGGTGAATCTGTGCGCCGAGCGCAA
ACTGCCGTTTGTCGCCGGCCATGCGCTGAACTGCTACAACGCGGTCACGCTGCGCCGGTTGCTGAAAGAAGGCATGGTAC
GCTGGTGTATGCCGGTGGAGCTGTCCCGCGACTGGCTGGTGAATTTGCTTAATCAGTGCGATGAACTGGGCATCCGCAAT
CAGTTTGAAGTGGAAGTGTTGAGCTACGGGCATCTGCCGCTGGCCTACTCCGCTCGCTGCTTTACCGCCCGTTCGGAAGA
CCGCCCGAAAGATGAGTGCGAAACCTGCTGTATCAAGTATCCAAACGGTCGTGACGTGCTCTCGCAAGAGAATCAGCAGG
TGTTTGTGCTTAACGGTATTCAGACCATGAGCGGCTATGTCTATAACCTTGGCAACGAACTGACGTCGATGCAGGGATTG
GTCGATATCGTGCGGCTGTCGCCGTTGGGGACGGAGACATTTGCCATGCTTGATGCCTTTCGCGCTAACGAAAACGGCGG
CGCGCCATTACCGCTTGCCGCGCATAGCGACTGTAACGGCTACTGGAAGCGGCTGGCAGGTCTGGAGCTACAGGCCTAG

Upstream 100 bases:

>100_bases
TCGTTCCACAGCGCGACTGGATGGAGACGCTCGGCGCGATGTCCGAAGGCACCCAAACCACGCTTGGCGCATATCACCGT
AAATGGCAGTGAGAGGAGCT

Downstream 100 bases:

>100_bases
CCGGATGGCGGCATAAATACCTTGTCCGGCCTACAAATAGCGATCCCGTAGGCCCGATAAGCGCAGCGCCATCGGGCATT
GTTTTTGCCGTCAGTCTCAT

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSE
LKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
VDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA

Sequences:

>Translated_292_residues
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSE
LKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
VDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>Mature_292_residues
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSE
LKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRN
QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
VDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=292, Percent_Identity=92.1232876712329, Blast_Score=566, Evalue=1e-163,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32545; Mature: 32545

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAAS
CCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCHHHHHH
AVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC
HHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCEE
FTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
EECCCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
VDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAAS
CCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCHHHHHH
AVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC
HHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCEE
FTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
EECCCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
VDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]