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The map label for this gene is intA [C]

Identifier: 39546348

GI number: 39546348

Start: 2879247

End: 2879414

Strand: Direct

Name: intA [C]

Synonym: STM2740.1N

Alternate gene names: 39546348

Gene position: 2879247-2879414 (Clockwise)

Preceding gene: 16766052

Following gene: 16766053

Centisome position: 59.28

GC content: 57.14

Gene sequence:

>168_bases
GTGCTGGCACACCAGAAAGAAGACGAGATCGAAGCGGCCTACAACCGCAGCGACTATCTGGAACAAAGGCGACCGCTGAT
GCAGTGGTGGGGAAACTACGTTGATGCCGCCAGACGGCAGGCGCTGCTCGGTGCAGAAGAACCGCTGCAAATCGTGGAAG
GAGAATAA

Upstream 100 bases:

>100_bases
CTTATCCGCATGGGGTTCGGCGGCGAACTGGTCGCCCACGGCATGCGCAGCCGCCAGGACCGCAGGCGCAGGTCATTTTC
CCCGTGAAGTCCTGGAATCT

Downstream 100 bases:

>100_bases
TGTGACCAGTCCCATTCGTCAGAATCTGTTTGAACGGGAATGTGATATGCCGCTTCTGGAAGCGCGGCATCTCGCCCTTC
TGCTTCTAGGCCTCGATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE

Sequences:

>Translated_55_residues
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
>Mature_55_residues
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6489; Mature: 6489

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
CCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
CCCCCCHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA