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The map label for this gene is 39546309

Identifier: 39546309

GI number: 39546309

Start: 1135266

End: 1136141

Strand: Direct

Name: 39546309

Synonym: STM1048.1N

Alternate gene names: NA

Gene position: 1135266-1136141 (Clockwise)

Preceding gene: 16764408

Following gene: 16764409

Centisome position: 23.37

GC content: 53.42

Gene sequence:

>876_bases
TTGCTGAAAAAAATTGACCTGACGGAGAATAACGCCAGCAAACTGCAACAATTTTCGAAGGAGTGGCAGGACGCTAACGA
TAAATGGAGCGCCACGTGGGGCGTCAAAATAGAGCAGACCAAAGACGGCAAATATTATGTGGCCGGACTTGGACTGAGCA
TGGAAGACACGCCTGACGGGAAGATAAGCCAGTTCCTGGTGGCGGCGGATCGCATTGCTTATATTAACCCGGCAAACGGA
AACGAGACGCCCGGATTCGTCATGCAGGGCGACCAGATAATCATGAATGAGGCGTTCCTGAAATACCTGAGCGCGCCGAC
CATTACCAGTGGCGGGAATCCTCCGGCATTTTCCCTGACGCCGGATGGAAAGCTGACTGCGAAAAATGCGGATATCAGCG
GCCATATCAACGCTGTATCTGGCTCGTTTACGGGAGAAATCAATGCCACCTCCGGTAAGTTTTCTGGCGTGATAGAAGCA
AGAGAGTTTGTCGGTGATATCTGCGGCTCAAAAGTCATGCAGGGCGTGAGCATCAGGGCGACGAACGACGAACGCAGCAC
CTCAACACGGTATACCGACAGCGCCACCTATCAGATAGGGAAAACCATCACGGTGATGGCTAACTGTGAGCGTAACGGTG
GCTCCGGTGCCATCACAGTCACGATAAATATTAACGGCCAGGTGAAAACGGCGGAGGTTATGCCGTATACCGCAGGGATT
CCGGCCATGTATCAGACCGTCGTCTTTTCGGTCTACACCACTTCACCTGTCGTGGATATCAGCGTCTCTCTGAGGGTCCG
TGGGCAGTACACCACGTCTGCTTCCGTCTGGCCGCTGGTGATGGTTTCCCGGTCGGGGAGCAACTTCACAAACTGA

Upstream 100 bases:

>100_bases
AATCAGTATTTGCGGAAGCATCCGGACGTCCGGGGATGACGCGAAAGGGTATCTGGATTTTTTTAAGGGACTGATTACGG
AGACGTATCTTGGTACGGAG

Downstream 100 bases:

>100_bases
CCGGATTTCCGGTCCCTTTCGTTTAATGAGGAACAAATATGACTATGTCGCGCGTAATTTCTCTGGCGGCAGGGCTTTCC
CTGTCCGTTTTATTTTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Hocificity Protein; Hocificity Protein J Of Prophage; Phage-Related Protein Tail Component; Hocificity Protein J Prophage; Gifsy-1 Prophage VhsJ; Host-Specificity Protein; Phage Tail Protein; Tail Fiber V

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANG
NETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEA
REFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGI
PAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN

Sequences:

>Translated_291_residues
MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANG
NETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEA
REFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGI
PAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
>Mature_291_residues
MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANG
NETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEA
REFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGI
PAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN

Specific function: Unknown

COG id: COG4733

COG function: function code S; Phage-related protein, tail component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31197; Mature: 31197

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDG
CCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCC
KISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLT
HHHHHEEEECEEEEEECCCCCCCCCEEEECCEEEHHHHHHHHHCCCCCCCCCCCCEEEEC
PDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRA
CCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE
TNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGI
CCCCCCCCCEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEEECCEEEEEEECCCCCCC
PAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
HHHHHHHEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDG
CCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCCCCC
KISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLT
HHHHHEEEECEEEEEECCCCCCCCCEEEECCEEEHHHHHHHHHCCCCCCCCCCCCEEEEC
PDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRA
CCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEE
TNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGI
CCCCCCCCCEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEEECCEEEEEEECCCCCCC
PAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
HHHHHHHEEEEEECCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA