| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 39546307
Identifier: 39546307
GI number: 39546307
Start: 1100136
End: 1101245
Strand: Reverse
Name: 39546307
Synonym: STM1008.S
Alternate gene names: NA
Gene position: 1101245-1100136 (Counterclockwise)
Preceding gene: 16764369
Following gene: 16764367
Centisome position: 22.67
GC content: 51.89
Gene sequence:
>1110_bases ATGGAAAACACAAATATTGTTACCACTGAGCAGCAGGCACCAAACACCATTTCTGCCAGTAACGCAATTTTTAACGTTCA GGCACTGGGTCAGTTAACAGCTTTCGCTAACCTGATGGCAGACTCACAGGTGACGGTACCGGCACACCTTGCAGGGAAAC CAGCCGACTGTATGGCTATCGTCATGCAGGCTATGCAATGGGGCATGAACCCTTACGCTGTGGCTCAGAAAACACACCTG GTTAACGGTGTTCTTGGTTACGAGGCACAACTGGTCAACGCAGTAATCGCAAGCTCCAGTGCCATTCATGGCCGTTTTCA TTACCGCTATGGGGGTGACTGGGAGCGCTGCACCAGGACACAGGAAATCACACGCGATAAAAACGGTAAAAATGGGAAGT ACACCGTCACTGAGCGCGTTCGTGGCTGGACAGATGAGGACGAGATCGGCCTGTTCGTTCAGGTTGGTGCCATTCTGCGA GGTGAATCTGAAATCACCTGGGGAGAACCTCTTTACCTCTCCGGCGTTGTTACCCGCAATTCTCCGCTATGGGTTTCAAA CCCTAAACAGCAAATTGCCTATCTGGGCGTTAAATATTGGGCTCGCCTGTACTGCCCGGAAGTGATCCTCGGCGTGTACA GCCCTGATGAGGTTGAGCAACGAGAAGAACGCGAGATTAACCCTGCTCCAGTCCAGCGCATGAGCGTACAGGAAATCACC AGCGAGGTTAGCACCAGGACCAGCGCGCAGGAGTCGGCAGCTAACGTTGATGCTGTTGCCGACGATCTTCGCGAACGCAT TGATACAGCAAGTTCCGTTGATCAGGCAAAAGCAATCCGTGCGGATATCGAATCACAGAAAGCGTTGCTGGGTACTGCGC TGTTCACCGAATTAAAAAACAAAGCAGTGAAGCGCTATTACCAGGTCGATGCACAGAACAAAGTCGAGGCAGTGATCAAC TCAATTCCAAACCCTGGCGAACCGGAAGCCGCAGAGATGTTTGCTAAAGCTGAAAGCACGCTTGGCGCTGCTAAACGCCA TCTTGGCGACGAACTGCACGATAAGTACCGCGTCACCCTGGACGATATGAAACCGGAATACATCGGCTAA
Upstream 100 bases:
>100_bases GAATGGTCAGCGCCTATCACAGAAGACTACACCGACGAACTGAACGATTTTGATGTGCGCCGCCTTGAAGCGTTGCGCGT ACAGGCATAAGGGGAAAATC
Downstream 100 bases:
>100_bases TTGCATCGGGAGGGGTTACGCCCTCCCGCCTGAGGAGGTTTTATGCGCCTTATAAATCGCAGTAAGCAATCGCCATTGGG CCGTCGCGCATGTGATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
Sequences:
>Translated_369_residues MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG >Mature_369_residues MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40782; Mature: 40782
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAI CCCCCEEEECCCCCCCEECCCCEEEHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHH VMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHH QEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRN HHHHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECC SPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT CCEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTL HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE DDMKPEYIG CCCCCCCCC >Mature Secondary Structure MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAI CCCCCEEEECCCCCCCEECCCCEEEHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHH VMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHH QEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRN HHHHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECC SPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT CCEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTL HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE DDMKPEYIG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA