Definition Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome.
Accession NC_003197
Length 4,857,432

Click here to switch to the map view.

The map label for this gene is 39546307

Identifier: 39546307

GI number: 39546307

Start: 1100136

End: 1101245

Strand: Reverse

Name: 39546307

Synonym: STM1008.S

Alternate gene names: NA

Gene position: 1101245-1100136 (Counterclockwise)

Preceding gene: 16764369

Following gene: 16764367

Centisome position: 22.67

GC content: 51.89

Gene sequence:

>1110_bases
ATGGAAAACACAAATATTGTTACCACTGAGCAGCAGGCACCAAACACCATTTCTGCCAGTAACGCAATTTTTAACGTTCA
GGCACTGGGTCAGTTAACAGCTTTCGCTAACCTGATGGCAGACTCACAGGTGACGGTACCGGCACACCTTGCAGGGAAAC
CAGCCGACTGTATGGCTATCGTCATGCAGGCTATGCAATGGGGCATGAACCCTTACGCTGTGGCTCAGAAAACACACCTG
GTTAACGGTGTTCTTGGTTACGAGGCACAACTGGTCAACGCAGTAATCGCAAGCTCCAGTGCCATTCATGGCCGTTTTCA
TTACCGCTATGGGGGTGACTGGGAGCGCTGCACCAGGACACAGGAAATCACACGCGATAAAAACGGTAAAAATGGGAAGT
ACACCGTCACTGAGCGCGTTCGTGGCTGGACAGATGAGGACGAGATCGGCCTGTTCGTTCAGGTTGGTGCCATTCTGCGA
GGTGAATCTGAAATCACCTGGGGAGAACCTCTTTACCTCTCCGGCGTTGTTACCCGCAATTCTCCGCTATGGGTTTCAAA
CCCTAAACAGCAAATTGCCTATCTGGGCGTTAAATATTGGGCTCGCCTGTACTGCCCGGAAGTGATCCTCGGCGTGTACA
GCCCTGATGAGGTTGAGCAACGAGAAGAACGCGAGATTAACCCTGCTCCAGTCCAGCGCATGAGCGTACAGGAAATCACC
AGCGAGGTTAGCACCAGGACCAGCGCGCAGGAGTCGGCAGCTAACGTTGATGCTGTTGCCGACGATCTTCGCGAACGCAT
TGATACAGCAAGTTCCGTTGATCAGGCAAAAGCAATCCGTGCGGATATCGAATCACAGAAAGCGTTGCTGGGTACTGCGC
TGTTCACCGAATTAAAAAACAAAGCAGTGAAGCGCTATTACCAGGTCGATGCACAGAACAAAGTCGAGGCAGTGATCAAC
TCAATTCCAAACCCTGGCGAACCGGAAGCCGCAGAGATGTTTGCTAAAGCTGAAAGCACGCTTGGCGCTGCTAAACGCCA
TCTTGGCGACGAACTGCACGATAAGTACCGCGTCACCCTGGACGATATGAAACCGGAATACATCGGCTAA

Upstream 100 bases:

>100_bases
GAATGGTCAGCGCCTATCACAGAAGACTACACCGACGAACTGAACGATTTTGATGTGCGCCGCCTTGAAGCGTTGCGCGT
ACAGGCATAAGGGGAAAATC

Downstream 100 bases:

>100_bases
TTGCATCGGGAGGGGTTACGCCCTCCCGCCTGAGGAGGTTTTATGCGCCTTATAAATCGCAGTAAGCAATCGCCATTGGG
CCGTCGCGCATGTGATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL
VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR
GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT
SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN
SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG

Sequences:

>Translated_369_residues
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL
VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR
GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT
SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN
SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
>Mature_369_residues
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHL
VNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILR
GESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT
SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVIN
SIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40782; Mature: 40782

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAI
CCCCCEEEECCCCCCCEECCCCEEEHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHH
VMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHH
QEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRN
HHHHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECC
SPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT
CCEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTL
HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE
DDMKPEYIG
CCCCCCCCC
>Mature Secondary Structure
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAI
CCCCCEEEECCCCCCCEECCCCEEEHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHH
VMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHH
QEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRN
HHHHHCCCCCCCCEEEHHHHCCCCCCCCCEEEEEECHHHCCCCCCCCCCCEEEEEEEECC
SPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEIT
CCEEECCHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
SEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTL
HHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEE
DDMKPEYIG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA