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The map label for this gene is parB [H]

Identifier: 38638036

GI number: 38638036

Start: 392322

End: 393308

Strand: Direct

Name: parB [H]

Synonym: PHG375

Alternate gene names: 38638036

Gene position: 392322-393308 (Clockwise)

Preceding gene: 38638035

Following gene: 38638038

Centisome position: 86.77

GC content: 55.12

Gene sequence:

>987_bases
ATGAATATGCGCAAGCGCATGCTGGAGCAAACCGCAAATTTGACTCCTGCTAATGAAATCAAAGTGGAAATCGCCCCCCA
AGTTGCAGACCGGCCGAAAACTGCACCAGGGATGATGGCGGCCTTGAGTGCGGCACAGCTTCGGATTCAAGAATTGGAGT
CCCAAGGGGCTGCAAGCACCGTTCCGGTCGAGAAGATTCGGCCGAATCCCTGGCAGCCGCGGATAAAGTTTGACGAGAGC
AGTCTCACTGAGCTCGCGGAGAGCATTAAGGAACTGGGCCTAATGCAGCCCATTCTCGTTCGACGAGTCACGCCGGACAA
CGGAGAATCCTATTTCGAGCTGATTGCCGGTGAGCGCCGTTGGCGCGCTCACCAGGTGCTGGGTCTACAAGAAATCAAGG
CGCTCATCACGGATGCGTCAGATGCAGATATGGCCGTCCTCGCTTTGGCCGAGAATGTCAGCCGTGAAGACCTCACCGAC
TACGAAATTGGCAAGGCGATGCGCCGTGCCGAGAAGGAATTTCCAGACAGGAAGCGGATGGCTGAATCCATGGGGATGAG
CCGGAGCACGCTCTATCGATATTTTGCCTTCGACAATCTACCCGAATTCATGCGTGTAGATCTGGAGAAGAACCCTTCGC
TTTTCAGCGGTACCGCGGCAAGTGACACCTACGCCGTGCTCAAGAAGCATGGCGAGCCAGCTGTTGCAGCGGCTCGCGAG
GTCTGGAAGCAACTTGTAGATGGTAGCCTTGAGCAGTCGAAGGTCGCCAAGCTGCTGGAGGCTTCGCTACTTCGTCGTGA
AGCGACGCCTGTAACTTCCCAGCGTGACATTCATAAAGTCTATGCCGGCAAGACTCAGGCCGGCAGTATTACCAAGGACT
CCGTGAGCTTTACCGTAAAGCTTAAAAGTGCTGTCCTGACTGCCGCTCAAGAGGAGCGGATACGGACGGTTATCAATGAA
CTTTTCGACGGAGGACCGCAACGTTAA

Upstream 100 bases:

>100_bases
CGAGGGCAGCAACAAGACATTCCAGCGTGTGCGCATTCCGTTCGACGAATATTGCCGTTGGGTGGATGAGTTTTACGCCG
GAAAGTGGGAGGACGCTTAA

Downstream 100 bases:

>100_bases
CAGTTGTCGTCTCCAGACTATTCGAACCCCTCACTGAGGGGTTTTTTTGTGTTCTGAGTCGGAGTGGCCTTGTCAGAAGC
GGAGTTTGTCGGTGCGAACG

Product: putative partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNMRKRMLEQTANLTPANEIKVEIAPQVADRPKTAPGMMAALSAAQLRIQELESQGAASTVPVEKIRPNPWQPRIKFDES
SLTELAESIKELGLMQPILVRRVTPDNGESYFELIAGERRWRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTD
YEIGKAMRRAEKEFPDRKRMAESMGMSRSTLYRYFAFDNLPEFMRVDLEKNPSLFSGTAASDTYAVLKKHGEPAVAAARE
VWKQLVDGSLEQSKVAKLLEASLLRREATPVTSQRDIHKVYAGKTQAGSITKDSVSFTVKLKSAVLTAAQEERIRTVINE
LFDGGPQR

Sequences:

>Translated_328_residues
MNMRKRMLEQTANLTPANEIKVEIAPQVADRPKTAPGMMAALSAAQLRIQELESQGAASTVPVEKIRPNPWQPRIKFDES
SLTELAESIKELGLMQPILVRRVTPDNGESYFELIAGERRWRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTD
YEIGKAMRRAEKEFPDRKRMAESMGMSRSTLYRYFAFDNLPEFMRVDLEKNPSLFSGTAASDTYAVLKKHGEPAVAAARE
VWKQLVDGSLEQSKVAKLLEASLLRREATPVTSQRDIHKVYAGKTQAGSITKDSVSFTVKLKSAVLTAAQEERIRTVINE
LFDGGPQR
>Mature_328_residues
MNMRKRMLEQTANLTPANEIKVEIAPQVADRPKTAPGMMAALSAAQLRIQELESQGAASTVPVEKIRPNPWQPRIKFDES
SLTELAESIKELGLMQPILVRRVTPDNGESYFELIAGERRWRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTD
YEIGKAMRRAEKEFPDRKRMAESMGMSRSTLYRYFAFDNLPEFMRVDLEKNPSLFSGTAASDTYAVLKKHGEPAVAAARE
VWKQLVDGSLEQSKVAKLLEASLLRREATPVTSQRDIHKVYAGKTQAGSITKDSVSFTVKLKSAVLTAAQEERIRTVINE
LFDGGPQR

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 36574; Mature: 36574

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRKRMLEQTANLTPANEIKVEIAPQVADRPKTAPGMMAALSAAQLRIQELESQGAAST
CCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
VPVEKIRPNPWQPRIKFDESSLTELAESIKELGLMQPILVRRVTPDNGESYFELIAGERR
CCHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCHH
WRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTDYEIGKAMRRAEKEFPDRKRM
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCHHHHH
AESMGMSRSTLYRYFAFDNLPEFMRVDLEKNPSLFSGTAASDTYAVLKKHGEPAVAAARE
HHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
VWKQLVDGSLEQSKVAKLLEASLLRREATPVTSQRDIHKVYAGKTQAGSITKDSVSFTVK
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEE
LKSAVLTAAQEERIRTVINELFDGGPQR
HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNMRKRMLEQTANLTPANEIKVEIAPQVADRPKTAPGMMAALSAAQLRIQELESQGAAST
CCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
VPVEKIRPNPWQPRIKFDESSLTELAESIKELGLMQPILVRRVTPDNGESYFELIAGERR
CCHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCHH
WRAHQVLGLQEIKALITDASDADMAVLALAENVSREDLTDYEIGKAMRRAEKEFPDRKRM
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCHHHHH
AESMGMSRSTLYRYFAFDNLPEFMRVDLEKNPSLFSGTAASDTYAVLKKHGEPAVAAARE
HHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
VWKQLVDGSLEQSKVAKLLEASLLRREATPVTSQRDIHKVYAGKTQAGSITKDSVSFTVK
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEE
LKSAVLTAAQEERIRTVINELFDGGPQR
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]