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The map label for this gene is repA

Identifier: 38638033

GI number: 38638033

Start: 386814

End: 388004

Strand: Direct

Name: repA

Synonym: PHG372

Alternate gene names: NA

Gene position: 386814-388004 (Clockwise)

Preceding gene: 38638032

Following gene: 38638035

Centisome position: 85.55

GC content: 61.46

Gene sequence:

>1191_bases
ATGAGCTATCGCTTCGACGGGCTTCCTATTGCCCCAAGAACAACAACGTGTGGCGGTGCGCCGCACTCTCCGGCCCCTAT
CGAAAGCGAAGCTTCGAAACGCAAGGCAGCCAGGTGCGATGCCCGCCGGCTGCCCGAGCGGGTTCTCAGAGCGATCGCGT
TGGTCTACGAGTCCGATGGGCTTCGGGCTTTGCACATCACCAATCGCCAAGTCTTGGCAACGCTCATCCGCTTCGCTCTG
AATCAGAAGGATCCTACCTCGCTCGCCTTCATAAAGAAGGCAACGATCGCGCAGCACCTCTCGATTAGCGAGGCCACTGT
CTATCGGGCGCTTGGCACACTTGAAGATGCCGGGCTTATTGAGCGTGAAAGGCAGCAACGCACGAGGGCGCAGCTCGAGG
TCGTTGGGCGGATCGGGTTCACCGCAAAGTTGCTACAGTGTATCGGGCTCGCCGGCAGGGAGCTTGGGTACCCAGAACCT
CAAACGGACTCCGACGAGTCGCGGTCCCGCTCCGCATGTCTCGCACCAGTGAGTGGCGTAAACAACCCCAAGCAGTCTTC
TACGAAGAAACATTCGGGCCCGAGAGAGTTTGTGCAAATTCACGATCGGGCTGTGCCCATTGATCTAGCGCCTCTCGTGC
GCGACCAAGAGCTGACGACGTCCGCCCTCTTCCTTCTGATGCGGCTCGCGAGAGAGGCCGGCCACAGACTGTCGGACGTT
GTCTCGGCGGCGGGTCATGTTCTTGGGCCGCTGCGGGGACGAGAGCTGTTCGCCTACCTCAAGTCGCTCCTCGGAAAGCC
CATAGACTATAGCTATGTCGTTCAAACTCGGAAGGCCCAAGAAGACGAGAGGCGCGCAACCGCCGCGCAGGCGGCGCAAG
ACCGGCTGGAGGTTGCCCAACTCGTTGAGCGATACCGTGGGCAACGGGTGTCCGCACCTGACGGTCGGATCTACGAGGTC
GACTCGGCCTCGATTGTGATCACCGAGGCCAACGGTCGGCGGAGTTCATTAGGGCACGACCAGGCGCGCGCCTGGCTGAT
CGAGATGGACAGAGCAGCGACTGGGCTCTCGCGTGCCTTGGCCCAGCCGTCGTCAGCGACACGGTCATCGTCGGCCATGG
CACAGGCCGCTATTGAGCAACTTCGCAGCATCCTCGGTGGCAGACCTGCACCCAACATGGTAGGTGGCTGA

Upstream 100 bases:

>100_bases
AAACCCTCTTGACTCGTCCAACAACAAGACAGTCCGAGTTTATGAAGCCCACCCTTCGTTGTCAATGCTCCCCCACAAGT
TTGCGCATTGACCGAAGAAG

Downstream 100 bases:

>100_bases
GCTCGGAGGTCTAGTTACACGCTCCAACGTGCTTGCAGGCCTTGAACCACCCGCTTGAGAGCGCTTCAACTCGCTTGGGG
GCGCTATGGCGCGCTCGAAG

Product: putative replication protein

Products: NA

Alternate protein names: Replication Protein A

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSYRFDGLPIAPRTTTCGGAPHSPAPIESEASKRKAARCDARRLPERVLRAIALVYESDGLRALHITNRQVLATLIRFAL
NQKDPTSLAFIKKATIAQHLSISEATVYRALGTLEDAGLIERERQQRTRAQLEVVGRIGFTAKLLQCIGLAGRELGYPEP
QTDSDESRSRSACLAPVSGVNNPKQSSTKKHSGPREFVQIHDRAVPIDLAPLVRDQELTTSALFLLMRLAREAGHRLSDV
VSAAGHVLGPLRGRELFAYLKSLLGKPIDYSYVVQTRKAQEDERRATAAQAAQDRLEVAQLVERYRGQRVSAPDGRIYEV
DSASIVITEANGRRSSLGHDQARAWLIEMDRAATGLSRALAQPSSATRSSSAMAQAAIEQLRSILGGRPAPNMVGG

Sequences:

>Translated_396_residues
MSYRFDGLPIAPRTTTCGGAPHSPAPIESEASKRKAARCDARRLPERVLRAIALVYESDGLRALHITNRQVLATLIRFAL
NQKDPTSLAFIKKATIAQHLSISEATVYRALGTLEDAGLIERERQQRTRAQLEVVGRIGFTAKLLQCIGLAGRELGYPEP
QTDSDESRSRSACLAPVSGVNNPKQSSTKKHSGPREFVQIHDRAVPIDLAPLVRDQELTTSALFLLMRLAREAGHRLSDV
VSAAGHVLGPLRGRELFAYLKSLLGKPIDYSYVVQTRKAQEDERRATAAQAAQDRLEVAQLVERYRGQRVSAPDGRIYEV
DSASIVITEANGRRSSLGHDQARAWLIEMDRAATGLSRALAQPSSATRSSSAMAQAAIEQLRSILGGRPAPNMVGG
>Mature_395_residues
SYRFDGLPIAPRTTTCGGAPHSPAPIESEASKRKAARCDARRLPERVLRAIALVYESDGLRALHITNRQVLATLIRFALN
QKDPTSLAFIKKATIAQHLSISEATVYRALGTLEDAGLIERERQQRTRAQLEVVGRIGFTAKLLQCIGLAGRELGYPEPQ
TDSDESRSRSACLAPVSGVNNPKQSSTKKHSGPREFVQIHDRAVPIDLAPLVRDQELTTSALFLLMRLAREAGHRLSDVV
SAAGHVLGPLRGRELFAYLKSLLGKPIDYSYVVQTRKAQEDERRATAAQAAQDRLEVAQLVERYRGQRVSAPDGRIYEVD
SASIVITEANGRRSSLGHDQARAWLIEMDRAATGLSRALAQPSSATRSSSAMAQAAIEQLRSILGGRPAPNMVGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43168; Mature: 43037

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRFDGLPIAPRTTTCGGAPHSPAPIESEASKRKAARCDARRLPERVLRAIALVYESDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LRALHITNRQVLATLIRFALNQKDPTSLAFIKKATIAQHLSISEATVYRALGTLEDAGLI
CEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ERERQQRTRAQLEVVGRIGFTAKLLQCIGLAGRELGYPEPQTDSDESRSRSACLAPVSGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCHHHHCCCCCC
NNPKQSSTKKHSGPREFVQIHDRAVPIDLAPLVRDQELTTSALFLLMRLAREAGHRLSDV
CCCCHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH
VSAAGHVLGPLRGRELFAYLKSLLGKPIDYSYVVQTRKAQEDERRATAAQAAQDRLEVAQ
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVERYRGQRVSAPDGRIYEVDSASIVITEANGRRSSLGHDQARAWLIEMDRAATGLSRAL
HHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQPSSATRSSSAMAQAAIEQLRSILGGRPAPNMVGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYRFDGLPIAPRTTTCGGAPHSPAPIESEASKRKAARCDARRLPERVLRAIALVYESDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LRALHITNRQVLATLIRFALNQKDPTSLAFIKKATIAQHLSISEATVYRALGTLEDAGLI
CEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
ERERQQRTRAQLEVVGRIGFTAKLLQCIGLAGRELGYPEPQTDSDESRSRSACLAPVSGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCHHHHCCCCCC
NNPKQSSTKKHSGPREFVQIHDRAVPIDLAPLVRDQELTTSALFLLMRLAREAGHRLSDV
CCCCHHCCCCCCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHH
VSAAGHVLGPLRGRELFAYLKSLLGKPIDYSYVVQTRKAQEDERRATAAQAAQDRLEVAQ
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVERYRGQRVSAPDGRIYEVDSASIVITEANGRRSSLGHDQARAWLIEMDRAATGLSRAL
HHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQPSSATRSSSAMAQAAIEQLRSILGGRPAPNMVGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA