| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637957
Identifier: 38637957
GI number: 38637957
Start: 313183
End: 313866
Strand: Direct
Name: 38637957
Synonym: PHG296
Alternate gene names: NA
Gene position: 313183-313866 (Clockwise)
Preceding gene: 38637956
Following gene: 38637958
Centisome position: 69.26
GC content: 66.96
Gene sequence:
>684_bases ATGGACATGCGTGACATCGAGCAGCTGCATGCTCAATACGCCCAACCACCCCTTACGATCGACATCTCTCCGGCGGGTGC AGCGACGGCGCCGCATCTTGGCTATGGCGGCACTTCCACCGCACCAGCAAGGGCCTCCACCTCCCCGTTCCCGTTCGCGT TGCGCGGCAATCCCCGGCTGCTGTGGGGGCTTGGCTTCGTTTCCGCCGCAGCGCTCATGTTCATCATTGGCACATCTATT GGGAAGCGGGAATCGCGTGCCGGCACCGAGCAGGTGCAGCCGGTTCACTCCGCTCCCGAAGCTTCCGCGCGTGTTCCGGC GGCCGACGGCCATGAATGGCCGCGCAAGACCAACAGCGTCCCCGCATCGGAAGTAGCTCAGAGCACTGTATTGCCGGTAT CTGGCGAGGCCGCAGTGGCGTCGACGTCCGCAGCATCCGCTGCCGCCGTGCCCGCGGAGCAAACGCGGGAGCGATCACCA GCGGAGCCGAAGGCGGAGACAGTGAAGCGATCTGCGGCCCCGGCTGCGCCTGCCCCTGCGCTTGCCCCTGCACCAGCACC GGCGAGGGCCGCGACCGTACTGGCCCCGGCCAAGACTGCACAGCAGCTGCCGACTAGTGCCGCGCCGGCGCGAAACACAG CGGCGCAGCATGCCAACTCCCCCACCGACATCAAGATGTTCTGA
Upstream 100 bases:
>100_bases GCCGCAAAGCGGATCACCGCGATTCACCAACTCTGCATCCCGGACACAGACAAGTTCGGACCCGACGGCACACTGATTTC ATCTCACCGGAGCTCCCCCG
Downstream 100 bases:
>100_bases GCGCCATGGAAAATCCTCCCATCTTCAGCGTGCTGCGTGCCGGCATGAGCATCCACGGCGACATTGTTTCGGACCATGGC TTCACTTGCCTGGCGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDMRDIEQLHAQYAQPPLTIDISPAGAATAPHLGYGGTSTAPARASTSPFPFALRGNPRLLWGLGFVSAAALMFIIGTSI GKRESRAGTEQVQPVHSAPEASARVPAADGHEWPRKTNSVPASEVAQSTVLPVSGEAAVASTSAASAAAVPAEQTRERSP AEPKAETVKRSAAPAAPAPALAPAPAPARAATVLAPAKTAQQLPTSAAPARNTAAQHANSPTDIKMF
Sequences:
>Translated_227_residues MDMRDIEQLHAQYAQPPLTIDISPAGAATAPHLGYGGTSTAPARASTSPFPFALRGNPRLLWGLGFVSAAALMFIIGTSI GKRESRAGTEQVQPVHSAPEASARVPAADGHEWPRKTNSVPASEVAQSTVLPVSGEAAVASTSAASAAAVPAEQTRERSP AEPKAETVKRSAAPAAPAPALAPAPAPARAATVLAPAKTAQQLPTSAAPARNTAAQHANSPTDIKMF >Mature_227_residues MDMRDIEQLHAQYAQPPLTIDISPAGAATAPHLGYGGTSTAPARASTSPFPFALRGNPRLLWGLGFVSAAALMFIIGTSI GKRESRAGTEQVQPVHSAPEASARVPAADGHEWPRKTNSVPASEVAQSTVLPVSGEAAVASTSAASAAAVPAEQTRERSP AEPKAETVKRSAAPAAPAPALAPAPAPARAATVLAPAKTAQQLPTSAAPARNTAAQHANSPTDIKMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23070; Mature: 23070
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMRDIEQLHAQYAQPPLTIDISPAGAATAPHLGYGGTSTAPARASTSPFPFALRGNPRL CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEE LWGLGFVSAAALMFIIGTSIGKRESRAGTEQVQPVHSAPEASARVPAADGHEWPRKTNSV EEHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASEVAQSTVLPVSGEAAVASTSAASAAAVPAEQTRERSPAEPKAETVKRSAAPAAPAPA CHHHHHHHHCCCCCCCCHHHCCCCCHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCC LAPAPAPARAATVLAPAKTAQQLPTSAAPARNTAAQHANSPTDIKMF CCCCCCCCCHHEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEC >Mature Secondary Structure MDMRDIEQLHAQYAQPPLTIDISPAGAATAPHLGYGGTSTAPARASTSPFPFALRGNPRL CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEE LWGLGFVSAAALMFIIGTSIGKRESRAGTEQVQPVHSAPEASARVPAADGHEWPRKTNSV EEHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASEVAQSTVLPVSGEAAVASTSAASAAAVPAEQTRERSPAEPKAETVKRSAAPAAPAPA CHHHHHHHHCCCCCCCCHHHCCCCCHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCC LAPAPAPARAATVLAPAKTAQQLPTSAAPARNTAAQHANSPTDIKMF CCCCCCCCCHHEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA