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The map label for this gene is fccA [H]

Identifier: 38637867

GI number: 38637867

Start: 224739

End: 225356

Strand: Direct

Name: fccA [H]

Synonym: PHG203

Alternate gene names: 38637867

Gene position: 224739-225356 (Clockwise)

Preceding gene: 38637866

Following gene: 38637868

Centisome position: 49.7

GC content: 63.92

Gene sequence:

>618_bases
ATGCTGACGCTGTCGATCTACAAAGGTGGTATTGCCGTCAATCGCGATGCCGAGTGGTTCGCGGACGAGTCCATCTCGTA
CAAGACGCTCGGCGAGATCTGCCTGGCCCAGCCAGGCGGCGTGGGCTTCCAGATCTGTGAGCAGAAGATCATGGCCCAGT
CGGCGCCGCAGCCCACGTCGAACAATCTCGAGGAAGCCTATCGTCGAGGCCCGGTACGCAAGGCAGACGAGCTGGTGTCG
CTCGGCAAGTCTGTCGGCCTCGACGGCGAGCGCCTGCAGCAGATCGTTCAGCGCTACAACAGTGACGTGGCCAACGGCCG
CGACAGCGTGTTCGGGCGCAGCGGCCTTTGGCGTCGCTGGGGCAAGCTCATCGCCATCGACACCGCGCCCTTCTACATCT
ATCCGTGCATCACAGCGATCCTGGCGACCTACTGCGGCCTGAAGGTGGATGCAGACATGCGCGTCATCGACATCCAGGGT
GCGCAGATTCCGCGACTGCATGCCGCAGGCGAAGTCGTCGGCGGCTTCCACGGCTCGGGCTACATGAGCGGTTCGTCGCT
GTCCGAGTCCGTCATCTTCGGCCGCGTCGCGGCTCGCACTGTGCTGGAGGGAGCATGA

Upstream 100 bases:

>100_bases
GCAACAGCGGTGTCGCAGACTGGCTCGGCTCGGGCGGATGGAGGAGCAAGACCGAAATTCCACTTACCCCCGTACCGAGA
TTGATGCCGGCCAGGAGGCC

Downstream 100 bases:

>100_bases
AGCCAACGGTTCTGCTCATCCTGGCGCATCCGGACAAGCGCGGCTTCGGCGGCGCGCTGGCTGAGGCCTACGTCAAGCCA
CTGCAAGCCCAAGGCTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome c; Flavocytochrome c3; Fcc3 [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLTLSIYKGGIAVNRDAEWFADESISYKTLGEICLAQPGGVGFQICEQKIMAQSAPQPTSNNLEEAYRRGPVRKADELVS
LGKSVGLDGERLQQIVQRYNSDVANGRDSVFGRSGLWRRWGKLIAIDTAPFYIYPCITAILATYCGLKVDADMRVIDIQG
AQIPRLHAAGEVVGGFHGSGYMSGSSLSESVIFGRVAARTVLEGA

Sequences:

>Translated_205_residues
MLTLSIYKGGIAVNRDAEWFADESISYKTLGEICLAQPGGVGFQICEQKIMAQSAPQPTSNNLEEAYRRGPVRKADELVS
LGKSVGLDGERLQQIVQRYNSDVANGRDSVFGRSGLWRRWGKLIAIDTAPFYIYPCITAILATYCGLKVDADMRVIDIQG
AQIPRLHAAGEVVGGFHGSGYMSGSSLSESVIFGRVAARTVLEGA
>Mature_205_residues
MLTLSIYKGGIAVNRDAEWFADESISYKTLGEICLAQPGGVGFQICEQKIMAQSAPQPTSNNLEEAYRRGPVRKADELVS
LGKSVGLDGERLQQIVQRYNSDVANGRDSVFGRSGLWRRWGKLIAIDTAPFYIYPCITAILATYCGLKVDADMRVIDIQG
AQIPRLHAAGEVVGGFHGSGYMSGSSLSESVIFGRVAARTVLEGA

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=133, Percent_Identity=35.3383458646617, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286
- InterPro:   IPR007087 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 22164; Mature: 22164

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSIYKGGIAVNRDAEWFADESISYKTLGEICLAQPGGVGFQICEQKIMAQSAPQPTS
CEEEEEECCCEEECCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
NNLEEAYRRGPVRKADELVSLGKSVGLDGERLQQIVQRYNSDVANGRDSVFGRSGLWRRW
CCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCHHHCCCCHHHHHH
GKLIAIDTAPFYIYPCITAILATYCGLKVDADMRVIDIQGAQIPRLHAAGEVVGGFHGSG
CCEEEEECCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCHHHCCHHHCCCCCCC
YMSGSSLSESVIFGRVAARTVLEGA
CCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTLSIYKGGIAVNRDAEWFADESISYKTLGEICLAQPGGVGFQICEQKIMAQSAPQPTS
CEEEEEECCCEEECCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
NNLEEAYRRGPVRKADELVSLGKSVGLDGERLQQIVQRYNSDVANGRDSVFGRSGLWRRW
CCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCHHHCCCCHHHHHH
GKLIAIDTAPFYIYPCITAILATYCGLKVDADMRVIDIQGAQIPRLHAAGEVVGGFHGSG
CCEEEEECCCCHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCCCHHHCCHHHCCCCCCC
YMSGSSLSESVIFGRVAARTVLEGA
CCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]