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The map label for this gene is 38637844

Identifier: 38637844

GI number: 38637844

Start: 196965

End: 197276

Strand: Direct

Name: 38637844

Synonym: PHG180

Alternate gene names: NA

Gene position: 196965-197276 (Clockwise)

Preceding gene: 38637841

Following gene: 38637845

Centisome position: 43.56

GC content: 58.33

Gene sequence:

>312_bases
ATGGCAACTTACAAAGAACTGATGGCGCAGAAGGCAGCTCTGGAGGCGCACTTGGAAGAGGCACGTGCGAATGAAGTCGC
CTCTGTCATCGAGCAGATTCAGAACCTGATGGCGGAATACGGGCTGACTGTCGAAGACGTTACCAAACGCCGTCGTGGTC
GTCCTGCCGGCAGCGGCGCTGGTAAGGCGAAAGCGGGATTGCCCCCGAAATACCAGGATCCGAAGACGGGCAAGACCTGG
TCTGGCCGCGGTCGTGCGCCGTCCTGGCTTGGCAAGAACCCTAACAAGTTCCTGATTGCAGAAGAGGCGTAA

Upstream 100 bases:

>100_bases
GACTGCTCATTACCCAGAAGGTTAAAGTTTTTATGCCCTGAAGATCAAATTGGCTCTAAACTACCTATCTGGATCTCTCG
ATCGGAAAGGAAACCAGAAG

Downstream 100 bases:

>100_bases
ATAGGCGCAGCACGTCCCGCCAGAATAGTGTCCAACCCCTGCATGCAGGGGTTTTCTTTTTGAGAGCAATCGCCATGTCA
TTTGAAGTGATTCATGCCGA

Product: H-NS-like protein

Products: NA

Alternate protein names: Hns-Like Protein; H-NS-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-NS; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS Histone-Like Protein

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MATYKELMAQKAALEAHLEEARANEVASVIEQIQNLMAEYGLTVEDVTKRRRGRPAGSGAGKAKAGLPPKYQDPKTGKTW
SGRGRAPSWLGKNPNKFLIAEEA

Sequences:

>Translated_103_residues
MATYKELMAQKAALEAHLEEARANEVASVIEQIQNLMAEYGLTVEDVTKRRRGRPAGSGAGKAKAGLPPKYQDPKTGKTW
SGRGRAPSWLGKNPNKFLIAEEA
>Mature_102_residues
ATYKELMAQKAALEAHLEEARANEVASVIEQIQNLMAEYGLTVEDVTKRRRGRPAGSGAGKAKAGLPPKYQDPKTGKTWS
GRGRAPSWLGKNPNKFLIAEEA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11209; Mature: 11078

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYKELMAQKAALEAHLEEARANEVASVIEQIQNLMAEYGLTVEDVTKRRRGRPAGSGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
GKAKAGLPPKYQDPKTGKTWSGRGRAPSWLGKNPNKFLIAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
ATYKELMAQKAALEAHLEEARANEVASVIEQIQNLMAEYGLTVEDVTKRRRGRPAGSGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
GKAKAGLPPKYQDPKTGKTWSGRGRAPSWLGKNPNKFLIAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA