| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
Click here to switch to the map view.
The map label for this gene is 38637825
Identifier: 38637825
GI number: 38637825
Start: 159765
End: 160955
Strand: Direct
Name: 38637825
Synonym: PHG161
Alternate gene names: NA
Gene position: 159765-160955 (Clockwise)
Preceding gene: 38637824
Following gene: 38637826
Centisome position: 35.33
GC content: 65.91
Gene sequence:
>1191_bases ATGCGCCTGGGCCTGACCTCGACCACCTACGCCTTGCCAAGCCGCGATCTAGTGGATTGGGAGTGCGTCGAGGACTATCG CGCCCATCGTGAGGCGCAAGAAAACGCCCGAAAAGACGCGGAACGTGACAGGCTGCGGGCAGCGGTCACGGCGGAACTGC GATGGCTGTCGGGCGAGGGGGACGAGCCTGGCTGGCCGGAGCTGCCGGACCCGAGATCCCCGAAGGTGCGTGCCGGGATC CCCTTGGGCGTGCCGCGACGACAGCGTGCAAAGCCACCCGCGCCACGCGAGTACGCGCTGGACTCGAGCGCGGCGGCGCA TTGGCTGTCGCTCGCGAAAGACCTTTGGTATCGGGACGCGCCCGAGCGGTTGCGCGGCCTGGTGCTTCACTGTTGGGCGT GGACGGCAAGCGCGAACGGCGTCGGATGCAAAAAAGATGAAGAGCCTGGGGAGCGCGCGCATCAATGGAACGAAGCGTAT TTCGCCGCAGCGACCGCCGCGGCCGCCACGCTGGGTGATGCCGGCCTCAGCGAGATGGTCCTCCAGCGCGTCGCCCAGTT GCCGCAAGATCGCTTCCTCGACGCCACCACCGCGGTGCTGCATGAGCTCGACAGACTCTGGATGAACAACGGGCTCGTGT CGGGTCCCTTAGTGTTATTGGTATGGGAGACCCTGGCGTCGCGCATCAGGGAATTCTGGGCGTGGAAGCGACTCACGTCT GAGTGCTCGACCAGCGCGGAAATCCATCTCACAGGCGCACTCGCTGCGCTGTTTATGGGGGAGTACGAGATCGGGAAGGG ACCTCGCTGCTATGTCCGTCCGCCCGGGGCTGAGGGAGCGGACGCCCTGTTGCCGATGCTCACGCGCCTGGCCGTGGAGG CCGCGCCGTCCACCTTCGTCGCCCTCGCGATACTTGGCCTGCTTGAGGTGCAGCCGCAAGTGCATCGACTGACGTTCCTT GCGGGAGTGGTCAGTGCCTGGTGGCGGGCGCAGGGTGCAAACACGGAATTCTGGAACGACTACGGCATAGGGCCCCGGGT ATGCGCCTGGGTCGAAAAGGCCATCCTAAGCGCTCCGGTACCCCAGGAGGTTCTGGATAGCGCGGAACTGACGTCCGTCG TGGATACGCTGGTCCAAACCGGCACGCCACTGGCGCGGATCCTCGACGAGAAGCTTGCGCGACCGCGCTGA
Upstream 100 bases:
>100_bases AAGCCTAAAGCAGCACCATTCCTGTCTCGTCGTCAACCACGGTGCTGGCGATCCGCTTACTGCGCAGCGATCCCTGCCAC CGGCAATGCTACGGACGCTG
Downstream 100 bases:
>100_bases CGCGGTCCTGTGGATCAAGTCCCACATGGCCCACCTCGGATTGACCTACGAGCAGCACCTCCTCGCGGCCGGCTGTTTCG CGTCGCCCGGCGTGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRLGLTSTTYALPSRDLVDWECVEDYRAHREAQENARKDAERDRLRAAVTAELRWLSGEGDEPGWPELPDPRSPKVRAGI PLGVPRRQRAKPPAPREYALDSSAAAHWLSLAKDLWYRDAPERLRGLVLHCWAWTASANGVGCKKDEEPGERAHQWNEAY FAAATAAAATLGDAGLSEMVLQRVAQLPQDRFLDATTAVLHELDRLWMNNGLVSGPLVLLVWETLASRIREFWAWKRLTS ECSTSAEIHLTGALAALFMGEYEIGKGPRCYVRPPGAEGADALLPMLTRLAVEAAPSTFVALAILGLLEVQPQVHRLTFL AGVVSAWWRAQGANTEFWNDYGIGPRVCAWVEKAILSAPVPQEVLDSAELTSVVDTLVQTGTPLARILDEKLARPR
Sequences:
>Translated_396_residues MRLGLTSTTYALPSRDLVDWECVEDYRAHREAQENARKDAERDRLRAAVTAELRWLSGEGDEPGWPELPDPRSPKVRAGI PLGVPRRQRAKPPAPREYALDSSAAAHWLSLAKDLWYRDAPERLRGLVLHCWAWTASANGVGCKKDEEPGERAHQWNEAY FAAATAAAATLGDAGLSEMVLQRVAQLPQDRFLDATTAVLHELDRLWMNNGLVSGPLVLLVWETLASRIREFWAWKRLTS ECSTSAEIHLTGALAALFMGEYEIGKGPRCYVRPPGAEGADALLPMLTRLAVEAAPSTFVALAILGLLEVQPQVHRLTFL AGVVSAWWRAQGANTEFWNDYGIGPRVCAWVEKAILSAPVPQEVLDSAELTSVVDTLVQTGTPLARILDEKLARPR >Mature_396_residues MRLGLTSTTYALPSRDLVDWECVEDYRAHREAQENARKDAERDRLRAAVTAELRWLSGEGDEPGWPELPDPRSPKVRAGI PLGVPRRQRAKPPAPREYALDSSAAAHWLSLAKDLWYRDAPERLRGLVLHCWAWTASANGVGCKKDEEPGERAHQWNEAY FAAATAAAATLGDAGLSEMVLQRVAQLPQDRFLDATTAVLHELDRLWMNNGLVSGPLVLLVWETLASRIREFWAWKRLTS ECSTSAEIHLTGALAALFMGEYEIGKGPRCYVRPPGAEGADALLPMLTRLAVEAAPSTFVALAILGLLEVQPQVHRLTFL AGVVSAWWRAQGANTEFWNDYGIGPRVCAWVEKAILSAPVPQEVLDSAELTSVVDTLVQTGTPLARILDEKLARPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43750; Mature: 43750
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGLTSTTYALPSRDLVDWECVEDYRAHREAQENARKDAERDRLRAAVTAELRWLSGEG CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC DEPGWPELPDPRSPKVRAGIPLGVPRRQRAKPPAPREYALDSSAAAHWLSLAKDLWYRDA CCCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCC PERLRGLVLHCWAWTASANGVGCKKDEEPGERAHQWNEAYFAAATAAAATLGDAGLSEMV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LQRVAQLPQDRFLDATTAVLHELDRLWMNNGLVSGPLVLLVWETLASRIREFWAWKRLTS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ECSTSAEIHLTGALAALFMGEYEIGKGPRCYVRPPGAEGADALLPMLTRLAVEAAPSTFV HHCCCCEEEEHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHH ALAILGLLEVQPQVHRLTFLAGVVSAWWRAQGANTEFWNDYGIGPRVCAWVEKAILSAPV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PQEVLDSAELTSVVDTLVQTGTPLARILDEKLARPR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRLGLTSTTYALPSRDLVDWECVEDYRAHREAQENARKDAERDRLRAAVTAELRWLSGEG CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC DEPGWPELPDPRSPKVRAGIPLGVPRRQRAKPPAPREYALDSSAAAHWLSLAKDLWYRDA CCCCCCCCCCCCCCCEECCCCCCCCCHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCC PERLRGLVLHCWAWTASANGVGCKKDEEPGERAHQWNEAYFAAATAAAATLGDAGLSEMV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LQRVAQLPQDRFLDATTAVLHELDRLWMNNGLVSGPLVLLVWETLASRIREFWAWKRLTS HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ECSTSAEIHLTGALAALFMGEYEIGKGPRCYVRPPGAEGADALLPMLTRLAVEAAPSTFV HHCCCCEEEEHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHH ALAILGLLEVQPQVHRLTFLAGVVSAWWRAQGANTEFWNDYGIGPRVCAWVEKAILSAPV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC PQEVLDSAELTSVVDTLVQTGTPLARILDEKLARPR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA