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The map label for this gene is tnpB

Identifier: 38637823

GI number: 38637823

Start: 157741

End: 158088

Strand: Direct

Name: tnpB

Synonym: PHG159

Alternate gene names: NA

Gene position: 157741-158088 (Clockwise)

Preceding gene: 38637822

Following gene: 38637824

Centisome position: 34.89

GC content: 64.37

Gene sequence:

>348_bases
ATGATCGGGTTGCCGGCGGGAACACGCATCTGGATCGCTGCAGGCGTGACCGACATGCGCTGCGGATTCAACGGGCTCGC
CGCGAAGGTGGAGGCGACTCTGCAGGAGAGCCCGTTCTCCGGCCATGTCTTCGTCTTCCGCGGCAGGCGCGGCAACGTCA
TCAAGGTGTTGTGGTCAACGGGCGATGGGCTTTGCTTGCTCTCGAAGCGCCTGGAGCGCGGACGTTTCGTCTGGCCGCAG
GCCGACAGCGGCAAGATCCACCTGACGCAAGCGCAGTTGTCGATGCTGCTGGAGGGGATCAACTGGAAGCAGCCCGAGCG
CACCTGGCCGCCACTGTCGGTGTTGTAA

Upstream 100 bases:

>100_bases
CGCACGGCGCCATTGAGATCCGTTTGGGCCGAGCGGTGATTCGCATTGAAGGGGCAGTCGACGCGACCACGTTGCGTACC
GTACTGGACCGTTTGACGCC

Downstream 100 bases:

>100_bases
ACCTTGCGGCATGTGCGTAAACTGCCGCGCATGCCAATCGACCCCAGCGATCTCCCCGACGACATTGAGGCCCTGAAGGC
CTTGGTGTTGGCACAGCGGG

Product: putative transposition-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIGLPAGTRIWIAAGVTDMRCGFNGLAAKVEATLQESPFSGHVFVFRGRRGNVIKVLWSTGDGLCLLSKRLERGRFVWPQ
ADSGKIHLTQAQLSMLLEGINWKQPERTWPPLSVL

Sequences:

>Translated_115_residues
MIGLPAGTRIWIAAGVTDMRCGFNGLAAKVEATLQESPFSGHVFVFRGRRGNVIKVLWSTGDGLCLLSKRLERGRFVWPQ
ADSGKIHLTQAQLSMLLEGINWKQPERTWPPLSVL
>Mature_115_residues
MIGLPAGTRIWIAAGVTDMRCGFNGLAAKVEATLQESPFSGHVFVFRGRRGNVIKVLWSTGDGLCLLSKRLERGRFVWPQ
ADSGKIHLTQAQLSMLLEGINWKQPERTWPPLSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 12745; Mature: 12745

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLPAGTRIWIAAGVTDMRCGFNGLAAKVEATLQESPFSGHVFVFRGRRGNVIKVLWST
CCCCCCCCEEEEEECCEEECCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEC
GDGLCLLSKRLERGRFVWPQADSGKIHLTQAQLSMLLEGINWKQPERTWPPLSVL
CCCEEEEHHHHHCCCEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGLPAGTRIWIAAGVTDMRCGFNGLAAKVEATLQESPFSGHVFVFRGRRGNVIKVLWST
CCCCCCCCEEEEEECCEEECCCCCCHHEEEEEEECCCCCCCCEEEEECCCCCEEEEEEEC
GDGLCLLSKRLERGRFVWPQADSGKIHLTQAQLSMLLEGINWKQPERTWPPLSVL
CCCEEEEHHHHHCCCEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]