| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637812
Identifier: 38637812
GI number: 38637812
Start: 144890
End: 145660
Strand: Direct
Name: 38637812
Synonym: PHG148
Alternate gene names: NA
Gene position: 144890-145660 (Clockwise)
Preceding gene: 38637811
Following gene: 38637813
Centisome position: 32.04
GC content: 59.14
Gene sequence:
>771_bases ATGTTCTTGGCACTTGAAAAGCTGTTGGGGGACGATGCGAAGCGCAACAAGGCCTTTGCAACCTTTGCAAAGGTACTCGA AAGGCGGTTCTCGGAATCGGACTGGGCCAGTTTCGGGCACGAGCACAACATTGAGGAGATCTATGGCAACGACCATCTCC TGCGGTCGGCCCAGTACGGGAACTCGGACTATAGGCTGTGCATCTTGCGAACGCTCGAATTCCTTTTCGATGACTACGCC AAGGCGCTCAAGGCGTTGCTGACCGATGCGTCGTTGCACAACACGCTCAAACGAGAGGACCCGGATCTCTACGCCATTGT GACGGATGAAGAGGTCCCGCATGTCCCCGCGAAGAAGCCACGCCGTTCGAAGCTGGAGGTGGTCAGGAAGGCTTTGCATG ATGCGGAGACGCTGCTCGCATCCGGTGGCCCCACGAGTGCCGTGGATCGGGTGCATACGGCGCTCCACGGCTACCTCAGG GAGGTCTGCGACAAGGCCAAGCTCTCGTACGGGGCGCAGCCGACAGTGACCGAGCTCTACAAGCTGATCCGCACGGAGCA CCCGGCTTTCGATGCAAAGGGCACCCATGCCGAGGCGATCAAGAAGGTTGCTAACGGTATGGCCAGTACGCTCGATGGGC TGAATACGTTGCGCAATCAGGCCAGCGTCGCGCATCCGAACGAAGATCTGCTGGACGATGTCGATGCGGGACTTGCCGTG AATGCCGCGCGCACTGTATTCAACTACGTGGCCGGTAAGGTCGGCGACTGA
Upstream 100 bases:
>100_bases TGCGGAGCCACATTCGCGCTGGCGCGCGGTGGGTGGGGTTGGTTCAGGTAGGTTCTGGGCGCCGCCATGCCCAGTAAATG GATAACAATTCAGGGAAGAT
Downstream 100 bases:
>100_bases AGAGCCTTCTAGTGTGCAAAAAAGCCGGCGGGGCAGGGGATCTCGGCGCGCGGTGCGAGTCCAGCCGTGGCCGGCTGGGG TGGGTTGGGGTTGGTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MFLALEKLLGDDAKRNKAFATFAKVLERRFSESDWASFGHEHNIEEIYGNDHLLRSAQYGNSDYRLCILRTLEFLFDDYA KALKALLTDASLHNTLKREDPDLYAIVTDEEVPHVPAKKPRRSKLEVVRKALHDAETLLASGGPTSAVDRVHTALHGYLR EVCDKAKLSYGAQPTVTELYKLIRTEHPAFDAKGTHAEAIKKVANGMASTLDGLNTLRNQASVAHPNEDLLDDVDAGLAV NAARTVFNYVAGKVGD
Sequences:
>Translated_256_residues MFLALEKLLGDDAKRNKAFATFAKVLERRFSESDWASFGHEHNIEEIYGNDHLLRSAQYGNSDYRLCILRTLEFLFDDYA KALKALLTDASLHNTLKREDPDLYAIVTDEEVPHVPAKKPRRSKLEVVRKALHDAETLLASGGPTSAVDRVHTALHGYLR EVCDKAKLSYGAQPTVTELYKLIRTEHPAFDAKGTHAEAIKKVANGMASTLDGLNTLRNQASVAHPNEDLLDDVDAGLAV NAARTVFNYVAGKVGD >Mature_256_residues MFLALEKLLGDDAKRNKAFATFAKVLERRFSESDWASFGHEHNIEEIYGNDHLLRSAQYGNSDYRLCILRTLEFLFDDYA KALKALLTDASLHNTLKREDPDLYAIVTDEEVPHVPAKKPRRSKLEVVRKALHDAETLLASGGPTSAVDRVHTALHGYLR EVCDKAKLSYGAQPTVTELYKLIRTEHPAFDAKGTHAEAIKKVANGMASTLDGLNTLRNQASVAHPNEDLLDDVDAGLAV NAARTVFNYVAGKVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28344; Mature: 28344
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLALEKLLGDDAKRNKAFATFAKVLERRFSESDWASFGHEHNIEEIYGNDHLLRSAQYG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHHHHCC NSDYRLCILRTLEFLFDDYAKALKALLTDASLHNTLKREDPDLYAIVTDEEVPHVPAKKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC RRSKLEVVRKALHDAETLLASGGPTSAVDRVHTALHGYLREVCDKAKLSYGAQPTVTELY CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KLIRTEHPAFDAKGTHAEAIKKVANGMASTLDGLNTLRNQASVAHPNEDLLDDVDAGLAV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH NAARTVFNYVAGKVGD HHHHHHHHHHHHCCCC >Mature Secondary Structure MFLALEKLLGDDAKRNKAFATFAKVLERRFSESDWASFGHEHNIEEIYGNDHLLRSAQYG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHHHHCC NSDYRLCILRTLEFLFDDYAKALKALLTDASLHNTLKREDPDLYAIVTDEEVPHVPAKKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC RRSKLEVVRKALHDAETLLASGGPTSAVDRVHTALHGYLREVCDKAKLSYGAQPTVTELY CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KLIRTEHPAFDAKGTHAEAIKKVANGMASTLDGLNTLRNQASVAHPNEDLLDDVDAGLAV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH NAARTVFNYVAGKVGD HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA