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The map label for this gene is ybgF [C]

Identifier: 38637810

GI number: 38637810

Start: 143140

End: 143640

Strand: Direct

Name: ybgF [C]

Synonym: PHG146

Alternate gene names: 38637810

Gene position: 143140-143640 (Clockwise)

Preceding gene: 38637809

Following gene: 38637811

Centisome position: 31.66

GC content: 62.08

Gene sequence:

>501_bases
GTGCTGCAGAACACGGTGGCGACGCTGCAGAAGCAGCAGAAGGACTACTACGCCGATCTGGATGCGCGCCTGAAGAAATT
CGAGCCGCAGCACGCTTCGGTCGAAGACCGCCAAGGCACGTCGCAGCCGGGCGAGAAGCCCGAATACGATGCCGCGCTCA
AGCATTTCCAGGCGGGCGACTTCAAGAGCGCCGGGAATGCGTTCTCGTCGTTTATCAAGAAGTATCCGCAGAGCCCGTAC
CTGCCGCTGGCCCAGTACTGGCTCGGCAACTCGCTCTACGCGCAGCGCGACTATAAGGGGTCCACCTGGGTGCTGCACAA
AATGATCGATGCCAACCCGAGGCATCCCAAAGTGCCGGACGCCATGATCGCGGTGGCCAATAATCAGCTCGAGTCCGGCC
AGAAGGCTGCCGGGCGCGAAACGCTGGAACAGGTGGTGGCCAAGTATCCCGGTACCGAAGGCGCGCGTGCGGCGGACAAC
CGGTTGAAGACGCTGAAGTGA

Upstream 100 bases:

>100_bases
GACCCAGCGAATTGAGCAGAACAGCCGCACCACGCTCGACCTGCAGAACCAGCTCGAAGGTCTACGCCAGGAACTGGCGC
GGCTACGCGGCCAGAACGAA

Downstream 100 bases:

>100_bases
GCGGGGCGGCTTCCAGCAAGCCGCACCACGCGCCGAAGGCCTGCTTTAGGTGGATTTTCAGATTCTTACGAACCCTACAT
TTTCCGGAGTGTGGGGTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLQNTVATLQKQQKDYYADLDARLKKFEPQHASVEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPY
LPLAQYWLGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADN
RLKTLK

Sequences:

>Translated_166_residues
MLQNTVATLQKQQKDYYADLDARLKKFEPQHASVEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPY
LPLAQYWLGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADN
RLKTLK
>Mature_166_residues
MLQNTVATLQKQQKDYYADLDARLKKFEPQHASVEDRQGTSQPGEKPEYDAALKHFQAGDFKSAGNAFSSFIKKYPQSPY
LPLAQYWLGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPDAMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADN
RLKTLK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=99, Percent_Identity=38.3838383838384, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18601; Mature: 18601

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQNTVATLQKQQKDYYADLDARLKKFEPQHASVEDRQGTSQPGEKPEYDAALKHFQAGD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
FKSAGNAFSSFIKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPD
CCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
AMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADNRLKTLK
HHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLQNTVATLQKQQKDYYADLDARLKKFEPQHASVEDRQGTSQPGEKPEYDAALKHFQAGD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
FKSAGNAFSSFIKKYPQSPYLPLAQYWLGNSLYAQRDYKGSTWVLHKMIDANPRHPKVPD
CCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCH
AMIAVANNQLESGQKAAGRETLEQVVAKYPGTEGARAADNRLKTLK
HHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]