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The map label for this gene is xerC [C]

Identifier: 38637800

GI number: 38637800

Start: 133609

End: 134607

Strand: Direct

Name: xerC [C]

Synonym: PHG136

Alternate gene names: 38637800

Gene position: 133609-134607 (Clockwise)

Preceding gene: 38637799

Following gene: 38637802

Centisome position: 29.55

GC content: 58.36

Gene sequence:

>999_bases
ATGACTACTACCGCCAGTCTCGCTCCGTTGCTGGAGCGTTTTTTTACGCAACGCCTGATGCAGCAGCGCCAGGCGAGTCC
CCACACGATCAGTTCCTATCGCGACACCTTTCGTCAGTTCCTGAAGTTCGCGCAGCAACGCCTGCACCGGCAGCCTTCAC
GCATGAATTTCGAGGAAATCGATGCCCCTTTGATCGTTGCATTTCTCGATGACCTGGAGCAGCGTCAGGGCGTGAGCGTT
CGCAGTCGAAATCTTCGCCTCACGGCAATTCATTCCTTCTTTCGTTACGCGGCGCTCGAGACGCCGGCTCATTCCGCTCA
GATCCAGCGGGTGCTTGCTATCCCCAGCAAGCGCTTTACCCGCACCCTGGTGCAATTCCTGACTCGCCAGGAAGTCGATG
CCCTGCTTGCCGCACCGGACCAGCGTACCTGGGCCGGCCGACGCGATCACGCCTTTTTGCTGGTCGCCGTGCAAACTGGC
CTTCGCCTGTCCGAGATGACCGGACTCAAACGCGATGACCTTGTTCTCGGAACCGGTGCTCACGTGCGGGTGATTGGCAA
GGGTAGGAAAGAGCGTTGTACGCCCATCGTCAGATCCACGCTCGCCGTACTGAAAGCTTGGCTGCGGGAACCCCAGCGCG
GTGAGGACGACGTGCTGTTTCCAAGCGCGAGGGGCGAACGCCTCACTGTTCATGGCGTGCAGTATCTGCTAAACAAGCAT
CGAGAGACCGCGTCAAAAATTTGTCCATCGTTGAAGCAGAAACAGGTCACCGTTCACCGTTTGAGGCATACGATGGCCAT
GGACCTTCTGCAGGCGGGCGTTGATCGTTCCGTGATTGCACTGTGGCTCGGGCATGAATCGGTGGAAACCACGCAGATCT
ATCTCGAAGCGACACTTGCGATGAAGGAGCAGGCTCTTGCGAAGACATCTCTGGCTCACGGCAAGCCAGGACGCTACCGG
CCGGCAGACGAACTTCTCGGCTTCCTGAATGGACTGTAG

Upstream 100 bases:

>100_bases
GTCACGTCCACATCGCGGATACGCAGTGGTATCTGAACGCCTCGCCGGAGCTGATGCGCGAGGCGATGCGCCGGCTGGAA
CAGCGCTGGGAGATTCAACC

Downstream 100 bases:

>100_bases
GGCCACGAAACTATGTCGGGTAGTGACGGGGGATGGCTCCACAACAAGTGCGCATCGGACGAGCACGGAGGCAAATCCCT
CATTACCCGATATAGTCAGG

Product: putative integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFAQQRLHRQPSRMNFEEIDAPLIVAFLDDLEQRQGVSV
RSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWAGRRDHAFLLVAVQTG
LRLSEMTGLKRDDLVLGTGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPQRGEDDVLFPSARGERLTVHGVQYLLNKH
RETASKICPSLKQKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAHGKPGRYR
PADELLGFLNGL

Sequences:

>Translated_332_residues
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFAQQRLHRQPSRMNFEEIDAPLIVAFLDDLEQRQGVSV
RSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWAGRRDHAFLLVAVQTG
LRLSEMTGLKRDDLVLGTGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPQRGEDDVLFPSARGERLTVHGVQYLLNKH
RETASKICPSLKQKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAHGKPGRYR
PADELLGFLNGL
>Mature_331_residues
TTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFAQQRLHRQPSRMNFEEIDAPLIVAFLDDLEQRQGVSVR
SRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFTRTLVQFLTRQEVDALLAAPDQRTWAGRRDHAFLLVAVQTGL
RLSEMTGLKRDDLVLGTGAHVRVIGKGRKERCTPIVRSTLAVLKAWLREPQRGEDDVLFPSARGERLTVHGVQYLLNKHR
ETASKICPSLKQKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLAMKEQALAKTSLAHGKPGRYRP
ADELLGFLNGL

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=288, Percent_Identity=31.5972222222222, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789261, Length=186, Percent_Identity=35.4838709677419, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37743; Mature: 37612

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFAQQRLHRQPSRMNFEEI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
DAPLIVAFLDDLEQRQGVSVRSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFT
CCHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
RTLVQFLTRQEVDALLAAPDQRTWAGRRDHAFLLVAVQTGLRLSEMTGLKRDDLVLGTGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCEEEECCC
HVRVIGKGRKERCTPIVRSTLAVLKAWLREPQRGEDDVLFPSARGERLTVHGVQYLLNKH
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEHHHHHHHHHHH
RETASKICPSLKQKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHH
MKEQALAKTSLAHGKPGRYRPADELLGFLNGL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TTTASLAPLLERFFTQRLMQQRQASPHTISSYRDTFRQFLKFAQQRLHRQPSRMNFEEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC
DAPLIVAFLDDLEQRQGVSVRSRNLRLTAIHSFFRYAALETPAHSAQIQRVLAIPSKRFT
CCHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH
RTLVQFLTRQEVDALLAAPDQRTWAGRRDHAFLLVAVQTGLRLSEMTGLKRDDLVLGTGA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCEEEECCC
HVRVIGKGRKERCTPIVRSTLAVLKAWLREPQRGEDDVLFPSARGERLTVHGVQYLLNKH
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEHHHHHHHHHHH
RETASKICPSLKQKQVTVHRLRHTMAMDLLQAGVDRSVIALWLGHESVETTQIYLEATLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHH
MKEQALAKTSLAHGKPGRYRPADELLGFLNGL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]