| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637779
Identifier: 38637779
GI number: 38637779
Start: 110971
End: 111615
Strand: Direct
Name: 38637779
Synonym: PHG114
Alternate gene names: NA
Gene position: 110971-111615 (Clockwise)
Preceding gene: 38637775
Following gene: 38637780
Centisome position: 24.54
GC content: 55.5
Gene sequence:
>645_bases ATGACCCCCTGGGAAATTCAAGGTACCGAGCTGATTAACTGCAATTGCTCATACGGTTGCCCTTGCCAGTTCAACGCGCT ACCGACCCATGGTTTTTGCGAAGCCATGGGTGCGATTTCGATCAGCAACGGCTTCTATGACGTCGTGCGACTCGACGGCG TCAACATCGCGGTGGTGTTCAAATGGCCGGGTCCGATTCACGAAGGCAAGGGCAAGTGCCAGCCAGTTGTCGACGAACGG GCTAGTCCGGAGCAACGTGATGCCGTTCTGAAAATCATGTCGGGTCAGGATACCGAGCCATTCGCAACGATGTTCTCTGT TTTCGCGTCGACGCTCGAACAGGCTTACGATCCTATCTTCACGACGATCGATTTCGACGTCGATGTTGATGCGAGGCGCG GCCGAATTCATGTCGAGGGGGTATTCGACATCGTGGGAGAGCCGATTCGGAATCCGGTGACGGGCGCCGAGCATCGCGCT CGAATCGATCTGCCGCTCGGCTTCGAATACGAGATTGCCGAAATCGGCTCGGGGACGAGTCGCTCGCAAGGCAATATCGC GCTGAATCTCAATAGCACGTACGCGCAGTTCGCACGACTGCATATGAACAATAAAGGTCTCATCCGGCATCATACTGCCA CATGA
Upstream 100 bases:
>100_bases TCAAACGATCGAGGAACAAGCATTGATGGCACCGAGCGAGCCCCGAAGTGGCGCTTGGTGTACATTCAGAATGCAGGGAA ACAACCATAGGACAACAACC
Downstream 100 bases:
>100_bases GCTGCATCGAGAATTTCCTCGGCCGTGAGCGCGTAATCACAGCACTTGGTATTGTTGCTGTTATCGTGTCGTCGTGGTAC TACTTGTGGACTGGTGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTPWEIQGTELINCNCSYGCPCQFNALPTHGFCEAMGAISISNGFYDVVRLDGVNIAVVFKWPGPIHEGKGKCQPVVDER ASPEQRDAVLKIMSGQDTEPFATMFSVFASTLEQAYDPIFTTIDFDVDVDARRGRIHVEGVFDIVGEPIRNPVTGAEHRA RIDLPLGFEYEIAEIGSGTSRSQGNIALNLNSTYAQFARLHMNNKGLIRHHTAT
Sequences:
>Translated_214_residues MTPWEIQGTELINCNCSYGCPCQFNALPTHGFCEAMGAISISNGFYDVVRLDGVNIAVVFKWPGPIHEGKGKCQPVVDER ASPEQRDAVLKIMSGQDTEPFATMFSVFASTLEQAYDPIFTTIDFDVDVDARRGRIHVEGVFDIVGEPIRNPVTGAEHRA RIDLPLGFEYEIAEIGSGTSRSQGNIALNLNSTYAQFARLHMNNKGLIRHHTAT >Mature_213_residues TPWEIQGTELINCNCSYGCPCQFNALPTHGFCEAMGAISISNGFYDVVRLDGVNIAVVFKWPGPIHEGKGKCQPVVDERA SPEQRDAVLKIMSGQDTEPFATMFSVFASTLEQAYDPIFTTIDFDVDVDARRGRIHVEGVFDIVGEPIRNPVTGAEHRAR IDLPLGFEYEIAEIGSGTSRSQGNIALNLNSTYAQFARLHMNNKGLIRHHTAT
Specific function: Unknown
COG id: COG5588
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23577; Mature: 23446
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWEIQGTELINCNCSYGCPCQFNALPTHGFCEAMGAISISNGFYDVVRLDGVNIAVVF CCCCCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHCCEEECCCEEEEEEECCCEEEEEE KWPGPIHEGKGKCQPVVDERASPEQRDAVLKIMSGQDTEPFATMFSVFASTLEQAYDPIF ECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE TTIDFDVDVDARRGRIHVEGVFDIVGEPIRNPVTGAEHRARIDLPLGFEYEIAEIGSGTS EEEEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCCEEEHEECCCCCC RSQGNIALNLNSTYAQFARLHMNNKGLIRHHTAT CCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure TPWEIQGTELINCNCSYGCPCQFNALPTHGFCEAMGAISISNGFYDVVRLDGVNIAVVF CCCCCCCCEEEEECCCCCCCEECCCCCCCHHHHHHCCEEECCCEEEEEEECCCEEEEEE KWPGPIHEGKGKCQPVVDERASPEQRDAVLKIMSGQDTEPFATMFSVFASTLEQAYDPIF ECCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCCEE TTIDFDVDVDARRGRIHVEGVFDIVGEPIRNPVTGAEHRARIDLPLGFEYEIAEIGSGTS EEEEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCCEEEHEECCCCCC RSQGNIALNLNSTYAQFARLHMNNKGLIRHHTAT CCCCCEEEEECHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA