| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637767
Identifier: 38637767
GI number: 38637767
Start: 95015
End: 96364
Strand: Direct
Name: 38637767
Synonym: PHG102
Alternate gene names: NA
Gene position: 95015-96364 (Clockwise)
Preceding gene: 38637765
Following gene: 38637768
Centisome position: 21.01
GC content: 61.26
Gene sequence:
>1350_bases ATGCAACGCGTCGAGATGGACGCGCACAAGCTAGACGGACGTTTCTGCGTGTCGCTTCCCCTCATGGGGGGCGGTTTCAA GGAGAAGATCGTTCATCGTCTCTGGGTCGTTGTGATCCTGGAGGTCGTTTCGCGCGCGGTGCTAGGGTACTACTTCAGCG TGAGACGGGAAGTATCGAAAGATGACGTCATGCGCGCGCTGAAGCGGGCATTGGGCAGATGGTGCCTGCGCCCGGTCAGT TTTTGCGATACGCCGTATCTGCCTGAAGCCGGGCTTCTTTCCGCTTTGGGTAGCGATTTCGTCGGGCTATGCTGGGACGA GACCAGCGTAGATGGTGCGCTTGCCGAGACTTGTCAGCACGTGCGGGATGCGCTGCGCGACAGCGTCGGCTCCACGCTAC TGGACCCGAAGACCTCGTTCTCGAAACGTCGAAGCAAGGATGACCGCCCGTTCATCGAGTCGTTTTTCCGCAATCTGGCC GGACAGGGATTTCAGCGTCTTTCCAACACCACCGGCGCCAATTTCCAGGACCGCAAGGGAAGACAGCCGGAAGAGGTCGC CCTGGCGAGTCGATTCCAGTACGAATATGCGGAAGAGTTGCTGGACGTGCTCATTGCCAACTACAACGCGACACCGCACA GCGGGATTGGTAACCGCACGCCGCTCGCGTATGCGAAGTTCTTGTACCACCATTCCCAGCAGAGCTTCCGGCGAGCCGAC CCCGCTATCGTGGACACGCTATTCAGCATCCGCAAGCGCTGCATCGTGCGCGGGGGCGCTAAAAGCGGGCGTGCCCCGTT CGTTGAGTTCCATTACGGCCGTTATACCAACGACGTGCTGCATAACCGGCACGACCTTGTCGGATCCGAGATCTGGGTGG TCTGCCACAAGGAGGATGACTGCCGGGTGGCGCTTGCCTCCACGCTGGACGGTATGTCACTCGGCGTTTTGCGGGCAGCA CCGCCTTGGAACATGTCGCCGCACAGCCTGTCGCTACGTGCTGCAATTTGCCAGGCGTGTACTCACGGAAAGTTTGCGAT TCCGGCAGGCGTCGACGCCATCGATGTCTTCATGCGCTACGTGGAGAGTCAGGCGCACAACCGCTTGCCGGTCCATCCGG CCTACCTCGAGGCACGGCGCATACTGGCAGCCGCAGCCGAATCATCAATCGGGCCTTCCATGCTGGATGCAGCAATGGCT CGGACCAAGGCAGGCAGCAGTTCTTCGAACGGTAGCAAGGGGGCCGCGCCGGAGCCGACGGCAAGACGCGCGCAGTCTGG CGCCTCGGACCCGCTGAAGCCTTCTGCGGGTTCCACGCTGCCTCCGCGTCGAATGGCGCAGTCGAGGTAA
Upstream 100 bases:
>100_bases GTCGGCCCACCCAAGGGCGCTGGCCGCGGCGAGTGGCGGGCCGAATTTGGCTTTGAAGCTGAGGTCCGGTGACGGAACCG GGCGGCCGGTGCTGAGGTTC
Downstream 100 bases:
>100_bases GCCATGTCCTTCTCACTACCCGAGCGCATCGATCCGCGGCACTGCATCGTGACGAAGCAGTACGCGGTGTATACACCGCC CATGCACGAAATGATCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MQRVEMDAHKLDGRFCVSLPLMGGGFKEKIVHRLWVVVILEVVSRAVLGYYFSVRREVSKDDVMRALKRALGRWCLRPVS FCDTPYLPEAGLLSALGSDFVGLCWDETSVDGALAETCQHVRDALRDSVGSTLLDPKTSFSKRRSKDDRPFIESFFRNLA GQGFQRLSNTTGANFQDRKGRQPEEVALASRFQYEYAEELLDVLIANYNATPHSGIGNRTPLAYAKFLYHHSQQSFRRAD PAIVDTLFSIRKRCIVRGGAKSGRAPFVEFHYGRYTNDVLHNRHDLVGSEIWVVCHKEDDCRVALASTLDGMSLGVLRAA PPWNMSPHSLSLRAAICQACTHGKFAIPAGVDAIDVFMRYVESQAHNRLPVHPAYLEARRILAAAAESSIGPSMLDAAMA RTKAGSSSSNGSKGAAPEPTARRAQSGASDPLKPSAGSTLPPRRMAQSR
Sequences:
>Translated_449_residues MQRVEMDAHKLDGRFCVSLPLMGGGFKEKIVHRLWVVVILEVVSRAVLGYYFSVRREVSKDDVMRALKRALGRWCLRPVS FCDTPYLPEAGLLSALGSDFVGLCWDETSVDGALAETCQHVRDALRDSVGSTLLDPKTSFSKRRSKDDRPFIESFFRNLA GQGFQRLSNTTGANFQDRKGRQPEEVALASRFQYEYAEELLDVLIANYNATPHSGIGNRTPLAYAKFLYHHSQQSFRRAD PAIVDTLFSIRKRCIVRGGAKSGRAPFVEFHYGRYTNDVLHNRHDLVGSEIWVVCHKEDDCRVALASTLDGMSLGVLRAA PPWNMSPHSLSLRAAICQACTHGKFAIPAGVDAIDVFMRYVESQAHNRLPVHPAYLEARRILAAAAESSIGPSMLDAAMA RTKAGSSSSNGSKGAAPEPTARRAQSGASDPLKPSAGSTLPPRRMAQSR >Mature_449_residues MQRVEMDAHKLDGRFCVSLPLMGGGFKEKIVHRLWVVVILEVVSRAVLGYYFSVRREVSKDDVMRALKRALGRWCLRPVS FCDTPYLPEAGLLSALGSDFVGLCWDETSVDGALAETCQHVRDALRDSVGSTLLDPKTSFSKRRSKDDRPFIESFFRNLA GQGFQRLSNTTGANFQDRKGRQPEEVALASRFQYEYAEELLDVLIANYNATPHSGIGNRTPLAYAKFLYHHSQQSFRRAD PAIVDTLFSIRKRCIVRGGAKSGRAPFVEFHYGRYTNDVLHNRHDLVGSEIWVVCHKEDDCRVALASTLDGMSLGVLRAA PPWNMSPHSLSLRAAICQACTHGKFAIPAGVDAIDVFMRYVESQAHNRLPVHPAYLEARRILAAAAESSIGPSMLDAAMA RTKAGSSSSNGSKGAAPEPTARRAQSGASDPLKPSAGSTLPPRRMAQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49496; Mature: 49496
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRVEMDAHKLDGRFCVSLPLMGGGFKEKIVHRLWVVVILEVVSRAVLGYYFSVRREVSK CCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DDVMRALKRALGRWCLRPVSFCDTPYLPEAGLLSALGSDFVGLCWDETSVDGALAETCQH HHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH VRDALRDSVGSTLLDPKTSFSKRRSKDDRPFIESFFRNLAGQGFQRLSNTTGANFQDRKG HHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RQPEEVALASRFQYEYAEELLDVLIANYNATPHSGIGNRTPLAYAKFLYHHSQQSFRRAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PAIVDTLFSIRKRCIVRGGAKSGRAPFVEFHYGRYTNDVLHNRHDLVGSEIWVVCHKEDD HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC CRVALASTLDGMSLGVLRAAPPWNMSPHSLSLRAAICQACTHGKFAIPAGVDAIDVFMRY CHHHHHHHCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH VESQAHNRLPVHPAYLEARRILAAAAESSIGPSMLDAAMARTKAGSSSSNGSKGAAPEPT HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH ARRAQSGASDPLKPSAGSTLPPRRMAQSR HHHHHCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MQRVEMDAHKLDGRFCVSLPLMGGGFKEKIVHRLWVVVILEVVSRAVLGYYFSVRREVSK CCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DDVMRALKRALGRWCLRPVSFCDTPYLPEAGLLSALGSDFVGLCWDETSVDGALAETCQH HHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH VRDALRDSVGSTLLDPKTSFSKRRSKDDRPFIESFFRNLAGQGFQRLSNTTGANFQDRKG HHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RQPEEVALASRFQYEYAEELLDVLIANYNATPHSGIGNRTPLAYAKFLYHHSQQSFRRAD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PAIVDTLFSIRKRCIVRGGAKSGRAPFVEFHYGRYTNDVLHNRHDLVGSEIWVVCHKEDD HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC CRVALASTLDGMSLGVLRAAPPWNMSPHSLSLRAAICQACTHGKFAIPAGVDAIDVFMRY CHHHHHHHCCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH VESQAHNRLPVHPAYLEARRILAAAAESSIGPSMLDAAMARTKAGSSSSNGSKGAAPEPT HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH ARRAQSGASDPLKPSAGSTLPPRRMAQSR HHHHHCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA