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The map label for this gene is hyaD [C]

Identifier: 38637735

GI number: 38637735

Start: 66167

End: 66718

Strand: Direct

Name: hyaD [C]

Synonym: PHG070

Alternate gene names: 38637735

Gene position: 66167-66718 (Clockwise)

Preceding gene: 38637734

Following gene: 38637736

Centisome position: 14.63

GC content: 69.57

Gene sequence:

>552_bases
ATGAGCGGCATCCTGGTCGCGGGCATCGGCAATGTATTCCTCGGCGACGACGGCTTTGGGGTCGAAGTGGTGCAGCGCCT
CGGCGCCCGCCAGGCCGCGCATGCCTTGCCGCCGTTTCCCGAAGGCGTAGTGGTGGCCGACTTCGGCATCCGCGGCATCG
ACCTGTGCTACGCGTTGCTCGACGGGGTGGACGCCGCCATCCTGGTCGATGCCACGCAACGCGGCGGGGCGCCCGGCAGC
CTCTATGTGATCGAGTTGCCGATGGACGCGCAGGACGGCGACGGCGCTGGCGATCCGTACGCGTCACCTGTGCTGATGTC
GCCGCATGAGATGAATCCGGCCCTCGTGCTGCGGGCGCTGCGGATGATGGGCGGCACTTGCGCGGACGTTGTGGTGATCG
GCTGCGAGCCCGCCGACTTCGGGCTCGGCGAGGGCGAAGAGGGCCGGCTCGGCCTGAGCGAGCCGGTGGCGGCAGCGGTG
GACCGCGCCGTTGCAATGGTCGAGGCAATGGTCGGGCGCAAGGCCGAGCAATTGTATGGACGGCCGGCGTAG

Upstream 100 bases:

>100_bases
GTGACCCCGGCAAGGACTTTGGGCTCGCGCGCATGCCGGGACATCGCTTCTTCTTCCGCCCGGACGAGATAGAGCCGCTG
GGCGGTGCGGAGGCACAGGC

Downstream 100 bases:

>100_bases
GCGCGGTGGTCGTGTTCCTTGTGCAGGAGGCATCATGAAAGGCTTTCTCAAGTACCTGGTCCTGCCGGCGCTGGTGGTCG
CGCTGTTGGCCAATATAAAG

Product: putative [NiFe] hydrogenase-specific C-terminal protease

Products: NA

Alternate protein names: Peptidase; Hydrogenase Maturation Protein HupD; Hydrogenase Expression/Formation Protein; Hydrogenase-Specific C-Terminal Protease; Hydrogenase Maturation Endopeptidase Hupd; Hydrogenase 2 Maturation Protease; [NiFe] Hydrogenase-Specific C-Terminal Protease; Nickel/Iron Hydrogenase Maturation Factor HyaD; NiFe-Hydrogenase-Specific Protease; HupD Hydrogenase Related Function

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSGILVAGIGNVFLGDDGFGVEVVQRLGARQAAHALPPFPEGVVVADFGIRGIDLCYALLDGVDAAILVDATQRGGAPGS
LYVIELPMDAQDGDGAGDPYASPVLMSPHEMNPALVLRALRMMGGTCADVVVIGCEPADFGLGEGEEGRLGLSEPVAAAV
DRAVAMVEAMVGRKAEQLYGRPA

Sequences:

>Translated_183_residues
MSGILVAGIGNVFLGDDGFGVEVVQRLGARQAAHALPPFPEGVVVADFGIRGIDLCYALLDGVDAAILVDATQRGGAPGS
LYVIELPMDAQDGDGAGDPYASPVLMSPHEMNPALVLRALRMMGGTCADVVVIGCEPADFGLGEGEEGRLGLSEPVAAAV
DRAVAMVEAMVGRKAEQLYGRPA
>Mature_182_residues
SGILVAGIGNVFLGDDGFGVEVVQRLGARQAAHALPPFPEGVVVADFGIRGIDLCYALLDGVDAAILVDATQRGGAPGSL
YVIELPMDAQDGDGAGDPYASPVLMSPHEMNPALVLRALRMMGGTCADVVVIGCEPADFGLGEGEEGRLGLSEPVAAAVD
RAVAMVEAMVGRKAEQLYGRPA

Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 18733; Mature: 18602

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGILVAGIGNVFLGDDGFGVEVVQRLGARQAAHALPPFPEGVVVADFGIRGIDLCYALL
CCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH
DGVDAAILVDATQRGGAPGSLYVIELPMDAQDGDGAGDPYASPVLMSPHEMNPALVLRAL
CCCCEEEEEECHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
RMMGGTCADVVVIGCEPADFGLGEGEEGRLGLSEPVAAAVDRAVAMVEAMVGRKAEQLYG
HHHCCCEEHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC
RPA
CCC
>Mature Secondary Structure 
SGILVAGIGNVFLGDDGFGVEVVQRLGARQAAHALPPFPEGVVVADFGIRGIDLCYALL
CCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHH
DGVDAAILVDATQRGGAPGSLYVIELPMDAQDGDGAGDPYASPVLMSPHEMNPALVLRAL
CCCCEEEEEECHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
RMMGGTCADVVVIGCEPADFGLGEGEEGRLGLSEPVAAAVDRAVAMVEAMVGRKAEQLYG
HHHCCCEEHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCC
RPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA