| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38637732
Identifier: 38637732
GI number: 38637732
Start: 63441
End: 64103
Strand: Direct
Name: 38637732
Synonym: PHG067
Alternate gene names: NA
Gene position: 63441-64103 (Clockwise)
Preceding gene: 38637731
Following gene: 38637733
Centisome position: 14.03
GC content: 71.04
Gene sequence:
>663_bases ATGAGCGCGGGACCGTTCCCCGAGGCGCGGACCGGCGTACAGGGGTGCGGCGGCTGGGTGGCGCGCCTGCGCCAGTTCAC GCGCAAGGCCGACTACGCGCAATGCGAGCTGTGCGGCGCGTCCATCGTCGCGGACCATGCCCATCTGTTCGACACCACGC GGCGCCAATTGCACTGCTGCTGCCGGGCATGCGCGCTGCTGTTCGGCAGCCAGCAGGGATCCCGCTATCGCCCGGTGCCA CGAGCAGGCCGCTATCTGGATGGGTTCCGGATGAGCGACGCACAGTGGGACGCGCTGGCGATCCCCATCGACGTGGCGTT CTTCTTCGTTGACTCGGGGGCCGCGCACGTCGTCGCGCTCTATCCGGGGCCGGCCGGTGGCACGCGCTCGCAGCTCGGCC TGGCGGCCTGGGACGACCTCGTTGCCGACAATCCCGACCTCACGCGCATGCGTCCCGACGTGGAAGCGCTGCTCGTCTAT CGCGCGCAAGGCGCCAGGGACTATTTCCTCGCGCCCATCGACCAGTGCTATGCGCTGACCGGGCTGATCCGCGCGCGCTG GCGCGGCCTGTCGGGGGGCAAGCCGGCGTGGGAGGCGATCCGGGGCTTCGTTGCCGCGCTCAAGGCAACGGGCCGCGTGC CGGAGGGCCTGCTCCATGCCTGA
Upstream 100 bases:
>100_bases TCGCCGGATTGGCCGACATCGACGTGCACGAACTGCGCTTTGTCCCGGCCAGGGAGATGCGCGGCCCGGACAGGCAAGGC CGGGTCGGGGGTGGCCAGCC
Downstream 100 bases:
>100_bases CCTAACGTTCAGCATCAGCGCGGCCGAGGTGGCGCCGTTCGCCGCCGTGCCGCTGCTGCTGTTCAAGCTGCAGATCGCGA ACGCGCCCGCCGGCGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSAGPFPEARTGVQGCGGWVARLRQFTRKADYAQCELCGASIVADHAHLFDTTRRQLHCCCRACALLFGSQQGSRYRPVP RAGRYLDGFRMSDAQWDALAIPIDVAFFFVDSGAAHVVALYPGPAGGTRSQLGLAAWDDLVADNPDLTRMRPDVEALLVY RAQGARDYFLAPIDQCYALTGLIRARWRGLSGGKPAWEAIRGFVAALKATGRVPEGLLHA
Sequences:
>Translated_220_residues MSAGPFPEARTGVQGCGGWVARLRQFTRKADYAQCELCGASIVADHAHLFDTTRRQLHCCCRACALLFGSQQGSRYRPVP RAGRYLDGFRMSDAQWDALAIPIDVAFFFVDSGAAHVVALYPGPAGGTRSQLGLAAWDDLVADNPDLTRMRPDVEALLVY RAQGARDYFLAPIDQCYALTGLIRARWRGLSGGKPAWEAIRGFVAALKATGRVPEGLLHA >Mature_219_residues SAGPFPEARTGVQGCGGWVARLRQFTRKADYAQCELCGASIVADHAHLFDTTRRQLHCCCRACALLFGSQQGSRYRPVPR AGRYLDGFRMSDAQWDALAIPIDVAFFFVDSGAAHVVALYPGPAGGTRSQLGLAAWDDLVADNPDLTRMRPDVEALLVYR AQGARDYFLAPIDQCYALTGLIRARWRGLSGGKPAWEAIRGFVAALKATGRVPEGLLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23913; Mature: 23781
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGPFPEARTGVQGCGGWVARLRQFTRKADYAQCELCGASIVADHAHLFDTTRRQLHCC CCCCCCCCHHCCHHHCCHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH CRACALLFGSQQGSRYRPVPRAGRYLDGFRMSDAQWDALAIPIDVAFFFVDSGAAHVVAL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHEEEEEEEECCCEEEEEE YPGPAGGTRSQLGLAAWDDLVADNPDLTRMRPDVEALLVYRAQGARDYFLAPIDQCYALT ECCCCCCCHHHCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCEECCCHHHHHHHH GLIRARWRGLSGGKPAWEAIRGFVAALKATGRVPEGLLHA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCC >Mature Secondary Structure SAGPFPEARTGVQGCGGWVARLRQFTRKADYAQCELCGASIVADHAHLFDTTRRQLHCC CCCCCCCHHCCHHHCCHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH CRACALLFGSQQGSRYRPVPRAGRYLDGFRMSDAQWDALAIPIDVAFFFVDSGAAHVVAL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHEEEEEEEECCCEEEEEE YPGPAGGTRSQLGLAAWDDLVADNPDLTRMRPDVEALLVYRAQGARDYFLAPIDQCYALT ECCCCCCCHHHCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCCCCCEECCCHHHHHHHH GLIRARWRGLSGGKPAWEAIRGFVAALKATGRVPEGLLHA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA