BacMap

Definition	Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession	NC_002935
Length	2,488,635

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The map label for this gene is yceI [H]

Identifier: 38234822

GI number: 38234822

Start: 2383456

End: 2384781

Strand: Direct

Name: yceI [H]

Synonym: DIP2287

Alternate gene names: 38234822

Gene position: 2383456-2384781 (Clockwise)

Preceding gene: 38234821

Following gene: 38234831

Centisome position: 95.77

GC content: 64.25

Gene sequence:

>1326_bases
GTGCTAGACGCTCAACAAAGTCCACCACTTACCCGCAACCAGCGCCTCGACCGGTTGCCACTGAATAGTCAACACAAACG
CCTCCTCGTCGGGTCCGGCCTCGGCTGGGCCCTCGACGCCATGGACGTCGGCCTGATCTCCTTCGTCATGGCAGCCCTGA
TCAAACACTGGGGACTCACCCACGGCCAAACATCCGTACTGGCATCAGCAGGATTCGTCGGCATGGCCATCGGCGCCACC
TTCGGCGGCCTCCTTGCAGACAAGTGGGGGCGTCGCAACGTATTCGCCCTCACCCTCCTCGTCTACGGACTTGCCACCGG
CGCCTCCGCGCTAGCCGGTGGCCTCGCTGTATTGATCGTGCTGCGATTCATCGTCGGACTTGGCCTCGGCGCCGAACTCC
CCGTGGCCTCCACCCTCGTCTCCGAATTCGCACCACTGCGCCACCGCGGCCGCCTCGTCGTCATCCTCGAAGCCTTCTGG
GCCGTCGGCTGGATCCTCGCCGCCATCATCGGCGCCTTCGTCGTCTCCGCCTCCGACTCCGGCTGGCGCTGGGCGCTCGT
CCTAGGCTGTGTGCCCGCTCTCTACTCCGCCTACGTGCGCAGCTCATTACCCGAATCCGTCCGCTTCCTCGAAGCCCGCG
GCCGCCACGACGAAGCCGAAGCCGCCGTCCAACAATTCGAAAAAGCCAGTGCAACCATCCCCGACACCCCCGTCATCGCA
ACCGAAGACCCCGCCGACCAAGCAGACTCCATCTTCGCCCCCAACATGCGCCGCCGCACCTTCGGCCTATGGACAGTCTG
GTTCTGCATCAACCTGTCCTACTACGGGGCATTCATCTGGATCCCATCCCTACTGGTTGCCGACGGCTTCTCCTTGGTCA
AATCCTTCCAGTTCACGCTGATTATCACCCTGGCCCAATTCCCAGGCTACGCACTAGCCGCATGGCTCATCGAAATCTGG
GGCCGCCGCACCACACTGGCAGTATTCCTCCTCGGCTCCGCCGGCTCCGCAGCCCTCTACGGATTTGCCGACACCACAGC
CTTGATCATCGCCGCCGGTTGCTGTCTCTCCTTCTTCAACCTCGGCGCGTGGGGCGCGCTCTACGCCATCAGCCCAGAAC
TCTACCCCTCTCAAATCCGCGGCACCGGCACCGGATCAGCAGCAGGATTCGGCCGTATCGCGTCCATCATCGCACCGCTG
ATCGTTCCCCCCATCGTGGCCGCCGCAGGCACCCCAGCGCTCTTCGCACTCTTCGGGGCCGCCTTCCTTGCAGCAGCCAT
CGCCGCATTCACCCTGCCCGAACAACGCGGCAAGGCCCTCGTCTAG

Upstream 100 bases:

>100_bases
TAGCAAAATCTATCCCCCATTATGACGTGGTAATTGCAAGAAACGTCACAATCTGGTTTGTTTCTTGGAAACCTTAAACC
ACTCATTGTAGGGAGGCAGC

Downstream 100 bases:

>100_bases
GCTTTAGCCAGCGTGCGGCATATCTACAAACCGCGAGTAGTGCAGCTGGTGAGCCACTTGGATGGTGTCGATAGGACCAC
CACGGTGCTTAGCCAGAATA

Product: putative integral membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLDAQQSPPLTRNQRLDRLPLNSQHKRLLVGSGLGWALDAMDVGLISFVMAALIKHWGLTHGQTSVLASAGFVGMAIGAT
FGGLLADKWGRRNVFALTLLVYGLATGASALAGGLAVLIVLRFIVGLGLGAELPVASTLVSEFAPLRHRGRLVVILEAFW
AVGWILAAIIGAFVVSASDSGWRWALVLGCVPALYSAYVRSSLPESVRFLEARGRHDEAEAAVQQFEKASATIPDTPVIA
TEDPADQADSIFAPNMRRRTFGLWTVWFCINLSYYGAFIWIPSLLVADGFSLVKSFQFTLIITLAQFPGYALAAWLIEIW
GRRTTLAVFLLGSAGSAALYGFADTTALIIAAGCCLSFFNLGAWGALYAISPELYPSQIRGTGTGSAAGFGRIASIIAPL
IVPPIVAAAGTPALFALFGAAFLAAAIAAFTLPEQRGKALV

Sequences:

>Translated_441_residues
MLDAQQSPPLTRNQRLDRLPLNSQHKRLLVGSGLGWALDAMDVGLISFVMAALIKHWGLTHGQTSVLASAGFVGMAIGAT
FGGLLADKWGRRNVFALTLLVYGLATGASALAGGLAVLIVLRFIVGLGLGAELPVASTLVSEFAPLRHRGRLVVILEAFW
AVGWILAAIIGAFVVSASDSGWRWALVLGCVPALYSAYVRSSLPESVRFLEARGRHDEAEAAVQQFEKASATIPDTPVIA
TEDPADQADSIFAPNMRRRTFGLWTVWFCINLSYYGAFIWIPSLLVADGFSLVKSFQFTLIITLAQFPGYALAAWLIEIW
GRRTTLAVFLLGSAGSAALYGFADTTALIIAAGCCLSFFNLGAWGALYAISPELYPSQIRGTGTGSAAGFGRIASIIAPL
IVPPIVAAAGTPALFALFGAAFLAAAIAAFTLPEQRGKALV
>Mature_441_residues
MLDAQQSPPLTRNQRLDRLPLNSQHKRLLVGSGLGWALDAMDVGLISFVMAALIKHWGLTHGQTSVLASAGFVGMAIGAT
FGGLLADKWGRRNVFALTLLVYGLATGASALAGGLAVLIVLRFIVGLGLGAELPVASTLVSEFAPLRHRGRLVVILEAFW
AVGWILAAIIGAFVVSASDSGWRWALVLGCVPALYSAYVRSSLPESVRFLEARGRHDEAEAAVQQFEKASATIPDTPVIA
TEDPADQADSIFAPNMRRRTFGLWTVWFCINLSYYGAFIWIPSLLVADGFSLVKSFQFTLIITLAQFPGYALAAWLIEIW
GRRTTLAVFLLGSAGSAALYGFADTTALIIAAGCCLSFFNLGAWGALYAISPELYPSQIRGTGTGSAAGFGRIASIIAPL
IVPPIVAAAGTPALFALFGAAFLAAAIAAFTLPEQRGKALV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI24308167, Length=440, Percent_Identity=29.3181818181818, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI213021148, Length=479, Percent_Identity=25.2609603340292, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI166064021, Length=376, Percent_Identity=27.1276595744681, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4507005, Length=421, Percent_Identity=24.9406175771971, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI33457322, Length=341, Percent_Identity=27.2727272727273, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI216548223, Length=333, Percent_Identity=24.9249249249249, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI24497497, Length=396, Percent_Identity=26.7676767676768, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI7662270, Length=300, Percent_Identity=25.3333333333333, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI90669191, Length=396, Percent_Identity=27.020202020202, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI31542327, Length=388, Percent_Identity=25.2577319587629, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI166197673, Length=406, Percent_Identity=29.3103448275862, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI24497490, Length=412, Percent_Identity=24.5145631067961, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4506999, Length=418, Percent_Identity=25.1196172248804, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI20070188, Length=434, Percent_Identity=24.6543778801843, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI24497476, Length=434, Percent_Identity=24.6543778801843, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI262399383, Length=261, Percent_Identity=25.6704980842912, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI302148518, Length=431, Percent_Identity=24.3619489559165, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI73695465, Length=297, Percent_Identity=26.2626262626263, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI8923870, Length=433, Percent_Identity=23.7875288683603, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI296080721, Length=420, Percent_Identity=24.5238095238095, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI296080719, Length=420, Percent_Identity=24.5238095238095, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI24497499, Length=420, Percent_Identity=24.5238095238095, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI296080734, Length=395, Percent_Identity=25.0632911392405, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI203098995, Length=207, Percent_Identity=31.4009661835749, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI23510410, Length=359, Percent_Identity=23.3983286908078, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI21553331, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI11415038, Length=382, Percent_Identity=22.7748691099476, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI148664184, Length=425, Percent_Identity=22.3529411764706, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87082159, Length=402, Percent_Identity=27.8606965174129, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788068, Length=429, Percent_Identity=27.5058275058275, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1786229, Length=442, Percent_Identity=24.8868778280543, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1788074, Length=420, Percent_Identity=28.0952380952381, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87081723, Length=405, Percent_Identity=28.3950617283951, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082404, Length=426, Percent_Identity=25.8215962441315, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082231, Length=258, Percent_Identity=25.1937984496124, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1790463, Length=415, Percent_Identity=22.4096385542169, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789207, Length=433, Percent_Identity=23.5565819861432, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789312, Length=402, Percent_Identity=24.3781094527363, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790550, Length=428, Percent_Identity=22.196261682243, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=470, Percent_Identity=28.936170212766, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI71986689, Length=444, Percent_Identity=24.0990990990991, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI193202825, Length=444, Percent_Identity=24.0990990990991, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32565921, Length=359, Percent_Identity=26.4623955431755, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71989525, Length=393, Percent_Identity=25.1908396946565, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71989531, Length=393, Percent_Identity=25.1908396946565, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17542342, Length=397, Percent_Identity=26.9521410579345, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71996338, Length=442, Percent_Identity=24.4343891402715, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71980582, Length=438, Percent_Identity=21.9178082191781, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71980584, Length=437, Percent_Identity=22.1967963386728, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323512, Length=518, Percent_Identity=24.3243243243243, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320595, Length=207, Percent_Identity=28.5024154589372, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323110, Length=456, Percent_Identity=23.0263157894737, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320705, Length=461, Percent_Identity=23.8611713665944, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321886, Length=444, Percent_Identity=22.7477477477477, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19922874, Length=430, Percent_Identity=26.9767441860465, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI24640198, Length=445, Percent_Identity=23.3707865168539, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24640196, Length=445, Percent_Identity=23.3707865168539, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24640200, Length=445, Percent_Identity=23.3707865168539, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24649618, Length=409, Percent_Identity=24.6943765281174, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI62484254, Length=418, Percent_Identity=24.6411483253589, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI161077756, Length=494, Percent_Identity=23.6842105263158, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19922134, Length=467, Percent_Identity=24.8394004282655, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24649616, Length=418, Percent_Identity=23.9234449760766, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19922616, Length=420, Percent_Identity=25.7142857142857, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24668456, Length=396, Percent_Identity=23.4848484848485, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24649622, Length=418, Percent_Identity=25.5980861244019, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21355657, Length=397, Percent_Identity=23.6775818639798, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24668440, Length=393, Percent_Identity=22.64631043257, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28573097, Length=471, Percent_Identity=21.8683651804671, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585484, Length=400, Percent_Identity=23, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20129657, Length=400, Percent_Identity=23, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46630; Mature: 46630

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAQQSPPLTRNQRLDRLPLNSQHKRLLVGSGLGWALDAMDVGLISFVMAALIKHWGLT
CCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
HGQTSVLASAGFVGMAIGATFGGLLADKWGRRNVFALTLLVYGLATGASALAGGLAVLIV
CCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRFIVGLGLGAELPVASTLVSEFAPLRHRGRLVVILEAFWAVGWILAAIIGAFVVSASDS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
GWRWALVLGCVPALYSAYVRSSLPESVRFLEARGRHDEAEAAVQQFEKASATIPDTPVIA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE
TEDPADQADSIFAPNMRRRTFGLWTVWFCINLSYYGAFIWIPSLLVADGFSLVKSFQFTL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IITLAQFPGYALAAWLIEIWGRRTTLAVFLLGSAGSAALYGFADTTALIIAAGCCLSFFN
EEEHHHCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHH
LGAWGALYAISPELYPSQIRGTGTGSAAGFGRIASIIAPLIVPPIVAAAGTPALFALFGA
CCCCHHHEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AFLAAAIAAFTLPEQRGKALV
HHHHHHHHHHCCCHHCCCCCC
>Mature Secondary Structure
MLDAQQSPPLTRNQRLDRLPLNSQHKRLLVGSGLGWALDAMDVGLISFVMAALIKHWGLT
CCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
HGQTSVLASAGFVGMAIGATFGGLLADKWGRRNVFALTLLVYGLATGASALAGGLAVLIV
CCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRFIVGLGLGAELPVASTLVSEFAPLRHRGRLVVILEAFWAVGWILAAIIGAFVVSASDS
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
GWRWALVLGCVPALYSAYVRSSLPESVRFLEARGRHDEAEAAVQQFEKASATIPDTPVIA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEE
TEDPADQADSIFAPNMRRRTFGLWTVWFCINLSYYGAFIWIPSLLVADGFSLVKSFQFTL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IITLAQFPGYALAAWLIEIWGRRTTLAVFLLGSAGSAALYGFADTTALIIAAGCCLSFFN
EEEHHHCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHH
LGAWGALYAISPELYPSQIRGTGTGSAAGFGRIASIIAPLIVPPIVAAAGTPALFALFGA
CCCCHHHEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AFLAAAIAAFTLPEQRGKALV
HHHHHHHHHHCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]