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The map label for this gene is ydhM [C]

Identifier: 38234810

GI number: 38234810

Start: 2365515

End: 2366141

Strand: Reverse

Name: ydhM [C]

Synonym: DIP2274

Alternate gene names: 38234810

Gene position: 2366141-2365515 (Counterclockwise)

Preceding gene: 38234811

Following gene: 38234808

Centisome position: 95.08

GC content: 52.95

Gene sequence:

>627_bases
TTGGCCGAGGCGAAAAGCACGAAGACGACGAGTCGTCGACGTAACCGTCCGAGCCCTCGTCAGCGCCTATTGGATGGCGC
AACGCAGCTTTTTACCACCGAGGGAATTCGGGTGATCGGCATTGATCGCATTTTGCGTGAGGCTGATGTAGCCAAGGCGA
GTTTGTACTCCCTGTTCGGATCCAAGGATGCGCTGGTTATTGCCTATTTGCAGAACTTGGATGAAAAGTGGCGTGAGCAG
TATTACGAGCGCACTGCTGAGATGGGTTCGCCAAGCGAGAAAATTCTCGCGTTTTTTGATCAGTGTATTGATGAGGAGCC
GCTGAAGGATTATCGCGGTTCGCACTTCCAGAATGCTGCTAACGAGTACCCGCGCCCAGAGACGGATAGTGAGCGCGAGA
TCGTGTCGGTTGTGATGGAACATCGCCGGTGGTGTTTGGAGACGTTAACTCAGTTGTTGACGGAGAAGAACGGGTATCCC
GGCACTGTTCAGGCTAATCAGTTGATGGTTTTTCTGGATGGTGGTCTTGCGGGTTGTCGTCTGAATCGCTCGGTGGAGTC
GTTGAAGACTGCTCGGGATCTTGCGGTTCAGTTGCTGTCTGCTCCTCCTGCTGATTATTCGATTTAG

Upstream 100 bases:

>100_bases
ATACCGATTAAGACACAAAAGGTGAATAGACTGATCTGTTCAGATATAGTGAAAAGCACTTGAATTTTTTGTAGAACTTC
TGGAAAGGAAGTGGATCGCT

Downstream 100 bases:

>100_bases
GATCAAGGCCCTTCTTAGCGGCCTTTTTCTTTTTGTATTTTGCTACGCGGCGGGCGATTTTTTCGATGCGTTCGGCATTT
TTTTCGTCGTTGATTTCGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Repressor

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAEAKSTKTTSRRRNRPSPRQRLLDGATQLFTTEGIRVIGIDRILREADVAKASLYSLFGSKDALVIAYLQNLDEKWREQ
YYERTAEMGSPSEKILAFFDQCIDEEPLKDYRGSHFQNAANEYPRPETDSEREIVSVVMEHRRWCLETLTQLLTEKNGYP
GTVQANQLMVFLDGGLAGCRLNRSVESLKTARDLAVQLLSAPPADYSI

Sequences:

>Translated_208_residues
MAEAKSTKTTSRRRNRPSPRQRLLDGATQLFTTEGIRVIGIDRILREADVAKASLYSLFGSKDALVIAYLQNLDEKWREQ
YYERTAEMGSPSEKILAFFDQCIDEEPLKDYRGSHFQNAANEYPRPETDSEREIVSVVMEHRRWCLETLTQLLTEKNGYP
GTVQANQLMVFLDGGLAGCRLNRSVESLKTARDLAVQLLSAPPADYSI
>Mature_207_residues
AEAKSTKTTSRRRNRPSPRQRLLDGATQLFTTEGIRVIGIDRILREADVAKASLYSLFGSKDALVIAYLQNLDEKWREQY
YERTAEMGSPSEKILAFFDQCIDEEPLKDYRGSHFQNAANEYPRPETDSEREIVSVVMEHRRWCLETLTQLLTEKNGYPG
TVQANQLMVFLDGGLAGCRLNRSVESLKTARDLAVQLLSAPPADYSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23608; Mature: 23477

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAKSTKTTSRRRNRPSPRQRLLDGATQLFTTEGIRVIGIDRILREADVAKASLYSLFG
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHC
SKDALVIAYLQNLDEKWREQYYERTAEMGSPSEKILAFFDQCIDEEPLKDYRGSHFQNAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHH
NEYPRPETDSEREIVSVVMEHRRWCLETLTQLLTEKNGYPGTVQANQLMVFLDGGLAGCR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCCCCCHH
LNRSVESLKTARDLAVQLLSAPPADYSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AEAKSTKTTSRRRNRPSPRQRLLDGATQLFTTEGIRVIGIDRILREADVAKASLYSLFG
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHC
SKDALVIAYLQNLDEKWREQYYERTAEMGSPSEKILAFFDQCIDEEPLKDYRGSHFQNAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHH
NEYPRPETDSEREIVSVVMEHRRWCLETLTQLLTEKNGYPGTVQANQLMVFLDGGLAGCR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCCCCCHH
LNRSVESLKTARDLAVQLLSAPPADYSI
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA