| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38234763
Identifier: 38234763
GI number: 38234763
Start: 2310948
End: 2311757
Strand: Reverse
Name: 38234763
Synonym: DIP2223
Alternate gene names: NA
Gene position: 2311757-2310948 (Counterclockwise)
Preceding gene: 38234764
Following gene: 38234762
Centisome position: 92.89
GC content: 55.68
Gene sequence:
>810_bases ATGAAGAAGACTCACTTGTTCCGCATTCCAGCGGCCACGACAGCGGCCGTTGCTTTGTTGCTGGCGTCCGGGCCCATTGC CAGTGCAGATAGCCGCACAATCACCGGCGCTACGGATGGGCTCAACATTTCCGATATTCGTTGTGATACCGGTTCCCTAA CGCTAATTAAACGTCCTCCCGCAGCGTTTGAGGGCGTCGATAAGGCAGACTTGCCCGCGGGAACTATCGACGGAGCAACA TTTACCCTTCGACGGATAGAAGGCATCGATCTCACCAAACAAGCTGGATGGGATGCGGCCAAAGCGCTTACGATCCAAGA AGCGCGAAGCAGGCTCAGCGACGAAGTTTGGAAGGCCGTGTCGGGGCGTGATGGTCGCGCGGTCGTAACTGGTCTCCCCA TGGGCGTCTACCTTGTTTCTGAGACTCCGCCAGCGAAACGACCTGCAGAATATCGGAGGACCCTGGACTTCTTAATCACG GTGCCTGCTGGAATGCGGACAGCGGATGGAAACGTTGCATCGTGGTCTTGTGACGTGCAGGTGTTTACCAAAGACACTGA CGATCTTCCCCCAACCGTGCCAGTCTTCCCGCCGGTAGAGTCTTCAGTCACGCTAACGCCGAGTTCACCTGTTCCAGGTA CCCCTAAAACCCCTGGCAAACCTGACCTGCCAGAGAAGTTCCGTAAGGAAGTTACCGATCGATTGGGAAACACGGGTGCT AACGTGCTGGGCATCGCAGCCCTAGGAATTGCACTCGCAATTGCCGGATTCCTTGTTCAAAGACGTAAGAAGAATGAGGA GAACGGGTAG
Upstream 100 bases:
>100_bases CGCTTCAGCGGCCGAGGAGTCCCAGTAATATGCAGAAACCAATTTCCCCAACACATGCAAACACCCAAGCAGTCGCCCAT TCCTGAAAGGACGCCCTACT
Downstream 100 bases:
>100_bases TCAACGTTGGCAATTGTGGGTCAAAAATGAGAAGGAATAGGGGCGCGTCCCGTGGACGTGTCGGTGTGCCACGTGTTGGT GTTGATTCCGCAGTGTTTGG
Product: potential surface-anchored protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKKTHLFRIPAATTAAVALLLASGPIASADSRTITGATDGLNISDIRCDTGSLTLIKRPPAAFEGVDKADLPAGTIDGAT FTLRRIEGIDLTKQAGWDAAKALTIQEARSRLSDEVWKAVSGRDGRAVVTGLPMGVYLVSETPPAKRPAEYRRTLDFLIT VPAGMRTADGNVASWSCDVQVFTKDTDDLPPTVPVFPPVESSVTLTPSSPVPGTPKTPGKPDLPEKFRKEVTDRLGNTGA NVLGIAALGIALAIAGFLVQRRKKNEENG
Sequences:
>Translated_269_residues MKKTHLFRIPAATTAAVALLLASGPIASADSRTITGATDGLNISDIRCDTGSLTLIKRPPAAFEGVDKADLPAGTIDGAT FTLRRIEGIDLTKQAGWDAAKALTIQEARSRLSDEVWKAVSGRDGRAVVTGLPMGVYLVSETPPAKRPAEYRRTLDFLIT VPAGMRTADGNVASWSCDVQVFTKDTDDLPPTVPVFPPVESSVTLTPSSPVPGTPKTPGKPDLPEKFRKEVTDRLGNTGA NVLGIAALGIALAIAGFLVQRRKKNEENG >Mature_269_residues MKKTHLFRIPAATTAAVALLLASGPIASADSRTITGATDGLNISDIRCDTGSLTLIKRPPAAFEGVDKADLPAGTIDGAT FTLRRIEGIDLTKQAGWDAAKALTIQEARSRLSDEVWKAVSGRDGRAVVTGLPMGVYLVSETPPAKRPAEYRRTLDFLIT VPAGMRTADGNVASWSCDVQVFTKDTDDLPPTVPVFPPVESSVTLTPSSPVPGTPKTPGKPDLPEKFRKEVTDRLGNTGA NVLGIAALGIALAIAGFLVQRRKKNEENG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28398; Mature: 28398
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTHLFRIPAATTAAVALLLASGPIASADSRTITGATDGLNISDIRCDTGSLTLIKRPP CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCCEEEEECCC AAFEGVDKADLPAGTIDGATFTLRRIEGIDLTKQAGWDAAKALTIQEARSRLSDEVWKAV HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SGRDGRAVVTGLPMGVYLVSETPPAKRPAEYRRTLDFLITVPAGMRTADGNVASWSCDVQ CCCCCCEEEEECCEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCEECCCCEEEEEEEEE VFTKDTDDLPPTVPVFPPVESSVTLTPSSPVPGTPKTPGKPDLPEKFRKEVTDRLGNTGA EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC NVLGIAALGIALAIAGFLVQRRKKNEENG HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKTHLFRIPAATTAAVALLLASGPIASADSRTITGATDGLNISDIRCDTGSLTLIKRPP CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCCEEEEECCC AAFEGVDKADLPAGTIDGATFTLRRIEGIDLTKQAGWDAAKALTIQEARSRLSDEVWKAV HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SGRDGRAVVTGLPMGVYLVSETPPAKRPAEYRRTLDFLITVPAGMRTADGNVASWSCDVQ CCCCCCEEEEECCEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCEECCCCEEEEEEEEE VFTKDTDDLPPTVPVFPPVESSVTLTPSSPVPGTPKTPGKPDLPEKFRKEVTDRLGNTGA EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC NVLGIAALGIALAIAGFLVQRRKKNEENG HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA