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The map label for this gene is ygcJ [H]

Identifier: 38234750

GI number: 38234750

Start: 2297798

End: 2298856

Strand: Reverse

Name: ygcJ [H]

Synonym: DIP2209

Alternate gene names: 38234750

Gene position: 2298856-2297798 (Counterclockwise)

Preceding gene: 38234751

Following gene: 38234749

Centisome position: 92.37

GC content: 46.08

Gene sequence:

>1059_bases
ATGTCACGCCATCTCACGTTTCACATTATTACAAATGTCCCATACTCCAATTTGAACCGAGACGATTCAGGTACGCCTAA
GAGAGTGTCGCTTGGTGGTGCTCTGCGAGCCCTTCATTCTTCTCAAAGCATCAAGAGGGGCATTCGTACAAAATATGAAC
TTGCTAGTCTTGATACCTCAATCCGATCAGGAAAGTTGGTCGAAGAGGTTGTGAGAGTTGGTCTGGACTTAAAACCAGAG
GTTGATGAGAAGCTCTTAAGGAAAGGTGCTGCGAAGATTATCGGTAGTCTCACTAAAGGCGAATCCTCTGAGGGGGAGTC
TGCTCGTTCTGCATGGATGAGCAGGGAAGAGATTACGACAGCAGCACAAACCGTAATTGATGGACAAGAAGACTCTGATT
TTATCCAAGATAATCGTACTGGTTCGTTGGCGATTGCAGCTTTTGGCCGGATGTTTGCGAATGCTCCAAAGAAGAACACA
GAGGCAGCATTGGCTGTTTCTCCAGGAGTCACGACTCATGCCGTTACGATTGAAACAGATTATTTTTCAACGGTAGACGA
CGTCCGCGAGCGAGAACATGATTCGGGCGCAACCTTTCTGGGGGTTGCACGATACGTGAATGGAACTTTCTATCGCACGG
TAAGTATTGACAAGGAGCAATTGCGCGAAAGTTGGTCTGGTTTTGGCCAAGAGGAATCTGTAGACAATCTTCGCGAATTA
ATTAAAGCTATTGTCTATGGTGCCCCGAGAGGTAAAGAGAATTCGACGGCTCCATATACGCTTCCGAGCCTAGTTTTTGC
AGAAGAACAACATTATCGAACTGCGTATTCTTTTGAGACGCCGGTTCTTGTTGGGAAAGATGGGGGCTTTGAGTTTCCTA
CGATTTGTGAACTAGATCGTCAATTTGCACGAGCTCGTTCTTTTGACAAAGGCAACTTTGGCCCACTGGAAGTCGTGTCC
GGAACAGCTGTACTTGAAGATGAGCAGTTCGAAGGAGTGCAAAGATCTGATCTTAATGGGTTGATTGAAGCTGTTGTGAA
TTGGGTGACAAATGATTGA

Upstream 100 bases:

>100_bases
GTTTTGCAAGATTACTACGGTTCTTTCGGCAGCCTTATTGAATAAGTGATCGACAGACACACTAATGACCGATAAAAATA
TCGACAGGAGAGAGGAAAAT

Downstream 100 bases:

>100_bases
GTCGGCGTATATCAGGTTGTCGGGGCCACTTCAATCATGGGCGGGGAGCGTTGTTACTGGAAACATTGTGCGGACTGAGC
CACGTCCAACGTTTAGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSRHLTFHIITNVPYSNLNRDDSGTPKRVSLGGALRALHSSQSIKRGIRTKYELASLDTSIRSGKLVEEVVRVGLDLKPE
VDEKLLRKGAAKIIGSLTKGESSEGESARSAWMSREEITTAAQTVIDGQEDSDFIQDNRTGSLAIAAFGRMFANAPKKNT
EAALAVSPGVTTHAVTIETDYFSTVDDVREREHDSGATFLGVARYVNGTFYRTVSIDKEQLRESWSGFGQEESVDNLREL
IKAIVYGAPRGKENSTAPYTLPSLVFAEEQHYRTAYSFETPVLVGKDGGFEFPTICELDRQFARARSFDKGNFGPLEVVS
GTAVLEDEQFEGVQRSDLNGLIEAVVNWVTND

Sequences:

>Translated_352_residues
MSRHLTFHIITNVPYSNLNRDDSGTPKRVSLGGALRALHSSQSIKRGIRTKYELASLDTSIRSGKLVEEVVRVGLDLKPE
VDEKLLRKGAAKIIGSLTKGESSEGESARSAWMSREEITTAAQTVIDGQEDSDFIQDNRTGSLAIAAFGRMFANAPKKNT
EAALAVSPGVTTHAVTIETDYFSTVDDVREREHDSGATFLGVARYVNGTFYRTVSIDKEQLRESWSGFGQEESVDNLREL
IKAIVYGAPRGKENSTAPYTLPSLVFAEEQHYRTAYSFETPVLVGKDGGFEFPTICELDRQFARARSFDKGNFGPLEVVS
GTAVLEDEQFEGVQRSDLNGLIEAVVNWVTND
>Mature_351_residues
SRHLTFHIITNVPYSNLNRDDSGTPKRVSLGGALRALHSSQSIKRGIRTKYELASLDTSIRSGKLVEEVVRVGLDLKPEV
DEKLLRKGAAKIIGSLTKGESSEGESARSAWMSREEITTAAQTVIDGQEDSDFIQDNRTGSLAIAAFGRMFANAPKKNTE
AALAVSPGVTTHAVTIETDYFSTVDDVREREHDSGATFLGVARYVNGTFYRTVSIDKEQLRESWSGFGQEESVDNLRELI
KAIVYGAPRGKENSTAPYTLPSLVFAEEQHYRTAYSFETPVLVGKDGGFEFPTICELDRQFARARSFDKGNFGPLEVVSG
TAVLEDEQFEGVQRSDLNGLIEAVVNWVTND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=326, Percent_Identity=26.3803680981595, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 38726; Mature: 38595

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHLTFHIITNVPYSNLNRDDSGTPKRVSLGGALRALHSSQSIKRGIRTKYELASLDTS
CCCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSGKLVEEVVRVGLDLKPEVDEKLLRKGAAKIIGSLTKGESSEGESARSAWMSREEITT
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AAQTVIDGQEDSDFIQDNRTGSLAIAAFGRMFANAPKKNTEAALAVSPGVTTHAVTIETD
HHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECC
YFSTVDDVREREHDSGATFLGVARYVNGTFYRTVSIDKEQLRESWSGFGQEESVDNLREL
HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHH
IKAIVYGAPRGKENSTAPYTLPSLVFAEEQHYRTAYSFETPVLVGKDGGFEFPTICELDR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHH
QFARARSFDKGNFGPLEVVSGTAVLEDEQFEGVQRSDLNGLIEAVVNWVTND
HHHHHHCCCCCCCCCCEEECCCEEECCHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRHLTFHIITNVPYSNLNRDDSGTPKRVSLGGALRALHSSQSIKRGIRTKYELASLDTS
CCEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSGKLVEEVVRVGLDLKPEVDEKLLRKGAAKIIGSLTKGESSEGESARSAWMSREEITT
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AAQTVIDGQEDSDFIQDNRTGSLAIAAFGRMFANAPKKNTEAALAVSPGVTTHAVTIETD
HHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEECC
YFSTVDDVREREHDSGATFLGVARYVNGTFYRTVSIDKEQLRESWSGFGQEESVDNLREL
HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHH
IKAIVYGAPRGKENSTAPYTLPSLVFAEEQHYRTAYSFETPVLVGKDGGFEFPTICELDR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCHHHHHHH
QFARARSFDKGNFGPLEVVSGTAVLEDEQFEGVQRSDLNGLIEAVVNWVTND
HHHHHHCCCCCCCCCCEEECCCEEECCHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]