| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is pstA [H]
Identifier: 38234476
GI number: 38234476
Start: 1961506
End: 1962369
Strand: Reverse
Name: pstA [H]
Synonym: DIP1908
Alternate gene names: 38234476
Gene position: 1962369-1961506 (Counterclockwise)
Preceding gene: 38234477
Following gene: 38234475
Centisome position: 78.85
GC content: 54.75
Gene sequence:
>864_bases ATGACTGTTTCGTTTACTCGTCGCCTGCGCAACAGCGTTGCCACTGTCGCGGTGACTTTCGCCATTGTTGCAGCTATCGT GCCGTTGCTTTCGGTGCTGTATACCTTGATCAGTCACGGTGTTGGCACGATCATCACCTCATCGTGGTGGATCTCCTCCC AAAAGGGCGTGATGTATTCGGTTGCTGGTGGTGGCGCGCTCCACGCGATGATCGGCACCTTGGTGCAAACGCTTCTGTGC AGCGCTGTTGCTATCCCGCTAGGTGTTTTAGCTGCGATCTTCCTTGTGGAATACGCCGGTGATTCCCGCCTGGGCAAAAT GTGCACCTTCATGGTGGACGTCATGACGGGTATCCCGTCAATCGTAGCCGCGTTGTTTGTCTATTCCTTATGGATCGTGC TTCTTGACTTCGAACGCTCTGGTATTGCGGTATCAATAGCGCTGCTGATCTTGATGGTGCCCGTGGTGGTTCGTACGACT GAAGAGATGCTGCGCATCGTTCCACAGGACCTGCGGGAGGCGTCGTTAGCCCTCGGAGTGCCTCGATGGCGCACGATCGT AAGCGTAGTGGTACCTACAGCCCTACCTGGAATTATTACCGGTGTGATGCTTGCGATTGCACGCGTGATGGGGGAATCTG CGCCCGTGCTCATTTTGGTGGGAAGCACCCAAGTGATCAATTGGGATGCGGTATCTGGCCCGCAGTCTTCCTTGCCGCTG ATGATGTTGGACATGTTCAAGGCGGGTACTGCCGATGCCGTATTGGACAAGATGTGGGGCGCGGGGTTGACCTTGGTGCT TCTTATTTCTCTTTTGACCATTGGAGCTCGTGTGATCTCCGCGAAAACGAAAGTCGCCGTATAA
Upstream 100 bases:
>100_bases TACATCGCCGCAGGCCTCGTGCTGTTCATTGTCACCTTTGTGGTCAATTCGCTGGCGCGCTTGATCGCCCAGAAGTCTTC TCGTTAGAAAGAGCCCTTCT
Downstream 100 bases:
>100_bases ATGCCAATTCCTAAGATTCAGCTGGACCATCTCAATATTTATTACGGCGATTTCCACGCGGTTCGAGACGTTAACCTAGA AATTCTTGCAAACCGAGTCA
Product: phosphate transport system permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTVSFTRRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYSVAGGGALHAMIGTLVQTLLC SAVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPSIVAALFVYSLWIVLLDFERSGIAVSIALLILMVPVVVRTT EEMLRIVPQDLREASLALGVPRWRTIVSVVVPTALPGIITGVMLAIARVMGESAPVLILVGSTQVINWDAVSGPQSSLPL MMLDMFKAGTADAVLDKMWGAGLTLVLLISLLTIGARVISAKTKVAV
Sequences:
>Translated_287_residues MTVSFTRRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYSVAGGGALHAMIGTLVQTLLC SAVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPSIVAALFVYSLWIVLLDFERSGIAVSIALLILMVPVVVRTT EEMLRIVPQDLREASLALGVPRWRTIVSVVVPTALPGIITGVMLAIARVMGESAPVLILVGSTQVINWDAVSGPQSSLPL MMLDMFKAGTADAVLDKMWGAGLTLVLLISLLTIGARVISAKTKVAV >Mature_286_residues TVSFTRRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYSVAGGGALHAMIGTLVQTLLCS AVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPSIVAALFVYSLWIVLLDFERSGIAVSIALLILMVPVVVRTTE EMLRIVPQDLREASLALGVPRWRTIVSVVVPTALPGIITGVMLAIARVMGESAPVLILVGSTQVINWDAVSGPQSSLPLM MLDMFKAGTADAVLDKMWGAGLTLVLLISLLTIGARVISAKTKVAV
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=279, Percent_Identity=35.4838709677419, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1790164, Length=199, Percent_Identity=24.1206030150754, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30277; Mature: 30146
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSFTRRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCEEEE VAGGGALHAMIGTLVQTLLCSAVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH IVAALFVYSLWIVLLDFERSGIAVSIALLILMVPVVVRTTEEMLRIVPQDLREASLALGV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWRTIVSVVVPTALPGIITGVMLAIARVMGESAPVLILVGSTQVINWDAVSGPQSSLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCH MMLDMFKAGTADAVLDKMWGAGLTLVLLISLLTIGARVISAKTKVAV HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVSFTRRLRNSVATVAVTFAIVAAIVPLLSVLYTLISHGVGTIITSSWWISSQKGVMYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCEEEE VAGGGALHAMIGTLVQTLLCSAVAIPLGVLAAIFLVEYAGDSRLGKMCTFMVDVMTGIPS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH IVAALFVYSLWIVLLDFERSGIAVSIALLILMVPVVVRTTEEMLRIVPQDLREASLALGV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PRWRTIVSVVVPTALPGIITGVMLAIARVMGESAPVLILVGSTQVINWDAVSGPQSSLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCH MMLDMFKAGTADAVLDKMWGAGLTLVLLISLLTIGARVISAKTKVAV HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8112854; 8843165; 9634230; 12368430; 12218036 [H]