| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is mod [H]
Identifier: 38234465
GI number: 38234465
Start: 1947027
End: 1948868
Strand: Reverse
Name: mod [H]
Synonym: DIP1895
Alternate gene names: 38234465
Gene position: 1948868-1947027 (Counterclockwise)
Preceding gene: 38234472
Following gene: 38234464
Centisome position: 78.31
GC content: 56.51
Gene sequence:
>1842_bases ATGACGCAACGCCTCCAGCTCACCTGGTACAACAAAGACAAAGCGCTCATCCCTACAGAGACCGGTAAGTACGGCTACAC GTGGGTTGATCCGTCCGATCCCCGCTATTGCGAGACCCATACCCTTATCTTCGATGACTATGTGCAGGGCGCGCAGACTC CGAAGTCGGACGAGTTTGAATGCTCTGAGCGCGCTGATCTGCAACCACAGGACGACAACCTGTTGATTCTCGGTGAATCA GGCGACGTTCTCGAAGCCCTTACCCGAGTGCCCGAGCTGGCCGAAAAGTATGTAGGCAAGGTCAAGCTGGTCTACATTGA TCCGCCGTTCAACACCGCGCAAACATTCGCCAGTTACGAGGACAATCTAGAGCACTCCATCTGGCTGACCATGATGCGCG ACCGACTCATCCACATGAAGAAGCTGCTCACTAACGACGGCTCCATCTGGGTTCACCTGGATGACGTCGAAGTACACCGG ATGCGTGTGCTGATGGATGAGGTGTTTGGGGCGGATCGATTCATCGCCACTGTTGCGTGGGAGAAAGACAAAGGGCGCAG AAATGACACCGACATATCTGGAGCCCACGACCTTATACTGATTTACGCGCCAAGCGGCAGGCAGTGGAAGAACGTACGTA ATCTGCTCCCTCGACTAGCATCGCAGGATGCCCGGTACCAGAACCCAGATAACGATCCAAGAGGGCCTTGGCTGCAAGGG GACAACGGTACAGCGAAGAGCGGCACCGAAAAGAATCGTTTTCCAGTAACGCTGCCATCTGGGCGAGTAGTCACACCGAA GGGACGTTATTGGCGATTCAGCCCGGAGGGTTTGGCGGAAGCCCGAGCAGATGGTCGAGTTTGGTTCGGTAAAGACGGAG ATTCTCTCCCGGTTATAAAGCGCTACCTAACGGACGTTCAAACAGGTCTTGTTCCTAGAACTTGGTGGAACGCGGATGAA GCTGGACACAATCAAGAAGCTAAACGGGATCATTTAAATAAGATGTTCCCGGAAGTTGAAAACCCTTTTTCCACTCCAAA GCCGGAGCGCCTTCTTGAACGCATCATTCATATCGGTTCAAATCCTGGTGACATTGTGTTGGATGTGTTCGCTGGCTCGG GCACCACGGCGGCCGTGGCGCAGAAGATGGGCCGGCGCTGGGTAACGTGCGAGCTGCTCGAGTCCACGTTCACCACGTTC ACGCGCCCGCGCCTTGAGAAGGTCGTCAACGACGAAGACCCAGGCGGAATTACGCGGACGAAGGGTGAACGGGTTGATGC GACCGTGGACGGGCTGCCCGATGGTGTCTCGCCGGAGGACGCCGCGAAGTTCACGAGTGTGCTGAATAAGCTGATCAAGG ACGACCCAGAACTAAAGAAGAGCGTCGAGGTGAAGACACTGAAGGCTGCCTCGAAGACCAAGCGCACGAAGGAAGTAGTC AACTGGCGTGGCGGTGGTGGCTTCCAGGTGGCGCATCTGTCGCCAGCGTGTTTCGACTATGACCCCGCCTTGGATCGGGT GATGCTGACGGCAGCTGCGACGGGTGAGACCTTGATCGAATCGGTGGCTGCGAATCTGGGGTTCACGCTGCTGCACCCAG ACGATGACTACGTGTTCGATGCTCGGCGGGGCAACGCACTGTTGAAGGTGGTGGAGGGTGTGGCCACGCCTCAGATCGTT GACTGGCTAGCTTCCCAGATTCAACCTGGCGAGACGATCGTGCTGGCAGCGACCACCGTCATGGACGGGGTACGCCAGCA TCTTCGCAAAGCCGTGAAGGGCTCGCGGGTGGTCGCTCTGCCTGATGATATTTTTCGCTACAGCGAAGGCGGTAACAAGT AA
Upstream 100 bases:
>100_bases CCACTGCATTAGTACCTTTATCTCAAGGGTTGGGTTCCACTATGGCTTTGACTATGGCTTTGACGAAGTAAACATTCAAG AAGGAAAAACGACTGATCAC
Downstream 100 bases:
>100_bases TGGCAACCCGACTCAACATCAGTTTTGACTCCGATTTGCTCGAGTCGATCAGTTCCGAGTTTGATTTGCGTGCCCCGAAC AAGGAAGCGCTGCGTCAGCT
Product: putative DNA methylase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MTQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLIFDDYVQGAQTPKSDEFECSERADLQPQDDNLLILGES GDVLEALTRVPELAEKYVGKVKLVYIDPPFNTAQTFASYEDNLEHSIWLTMMRDRLIHMKKLLTNDGSIWVHLDDVEVHR MRVLMDEVFGADRFIATVAWEKDKGRRNDTDISGAHDLILIYAPSGRQWKNVRNLLPRLASQDARYQNPDNDPRGPWLQG DNGTAKSGTEKNRFPVTLPSGRVVTPKGRYWRFSPEGLAEARADGRVWFGKDGDSLPVIKRYLTDVQTGLVPRTWWNADE AGHNQEAKRDHLNKMFPEVENPFSTPKPERLLERIIHIGSNPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTF TRPRLEKVVNDEDPGGITRTKGERVDATVDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTKRTKEVV NWRGGGGFQVAHLSPACFDYDPALDRVMLTAAATGETLIESVAANLGFTLLHPDDDYVFDARRGNALLKVVEGVATPQIV DWLASQIQPGETIVLAATTVMDGVRQHLRKAVKGSRVVALPDDIFRYSEGGNK
Sequences:
>Translated_613_residues MTQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLIFDDYVQGAQTPKSDEFECSERADLQPQDDNLLILGES GDVLEALTRVPELAEKYVGKVKLVYIDPPFNTAQTFASYEDNLEHSIWLTMMRDRLIHMKKLLTNDGSIWVHLDDVEVHR MRVLMDEVFGADRFIATVAWEKDKGRRNDTDISGAHDLILIYAPSGRQWKNVRNLLPRLASQDARYQNPDNDPRGPWLQG DNGTAKSGTEKNRFPVTLPSGRVVTPKGRYWRFSPEGLAEARADGRVWFGKDGDSLPVIKRYLTDVQTGLVPRTWWNADE AGHNQEAKRDHLNKMFPEVENPFSTPKPERLLERIIHIGSNPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTF TRPRLEKVVNDEDPGGITRTKGERVDATVDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTKRTKEVV NWRGGGGFQVAHLSPACFDYDPALDRVMLTAAATGETLIESVAANLGFTLLHPDDDYVFDARRGNALLKVVEGVATPQIV DWLASQIQPGETIVLAATTVMDGVRQHLRKAVKGSRVVALPDDIFRYSEGGNK >Mature_612_residues TQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLIFDDYVQGAQTPKSDEFECSERADLQPQDDNLLILGESG DVLEALTRVPELAEKYVGKVKLVYIDPPFNTAQTFASYEDNLEHSIWLTMMRDRLIHMKKLLTNDGSIWVHLDDVEVHRM RVLMDEVFGADRFIATVAWEKDKGRRNDTDISGAHDLILIYAPSGRQWKNVRNLLPRLASQDARYQNPDNDPRGPWLQGD NGTAKSGTEKNRFPVTLPSGRVVTPKGRYWRFSPEGLAEARADGRVWFGKDGDSLPVIKRYLTDVQTGLVPRTWWNADEA GHNQEAKRDHLNKMFPEVENPFSTPKPERLLERIIHIGSNPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTFT RPRLEKVVNDEDPGGITRTKGERVDATVDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTKRTKEVVN WRGGGGFQVAHLSPACFDYDPALDRVMLTAAATGETLIESVAANLGFTLLHPDDDYVFDARRGNALLKVVEGVATPQIVD WLASQIQPGETIVLAATTVMDGVRQHLRKAVKGSRVVALPDDIFRYSEGGNK
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 68602; Mature: 68471
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLIFDDYVQGAQTPKSDEFE CCCEEEEEEECCCCEECCCCCCCCCEEECCCCCCCEECEEEEEEHHHHCCCCCCCCCCCC CSERADLQPQDDNLLILGESGDVLEALTRVPELAEKYVGKVKLVYIDPPFNTAQTFASYE CHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH DNLEHSIWLTMMRDRLIHMKKLLTNDGSIWVHLDDVEVHRMRVLMDEVFGADRFIATVAW CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEE EKDKGRRNDTDISGAHDLILIYAPSGRQWKNVRNLLPRLASQDARYQNPDNDPRGPWLQG ECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC DNGTAKSGTEKNRFPVTLPSGRVVTPKGRYWRFSPEGLAEARADGRVWFGKDGDSLPVIK CCCCCCCCCCCCCCCEECCCCEEECCCCCEEEECCHHHHHHCCCCCEEECCCCCCCHHHH RYLTDVQTGLVPRTWWNADEAGHNQEAKRDHLNKMFPEVENPFSTPKPERLLERIIHIGS HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC NPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTFTRPRLEKVVNDEDPGGITRT CCCCEEEEEECCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KGERVDATVDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTKRTKEVV CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NWRGGGGFQVAHLSPACFDYDPALDRVMLTAAATGETLIESVAANLGFTLLHPDDDYVFD CCCCCCCEEEEECCCCCCCCCHHHHHEEHHHHCCHHHHHHHHHHHCCEEEECCCCCEEEE ARRGNALLKVVEGVATPQIVDWLASQIQPGETIVLAATTVMDGVRQHLRKAVKGSRVVAL CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEC PDDIFRYSEGGNK CHHHHHHCCCCCC >Mature Secondary Structure TQRLQLTWYNKDKALIPTETGKYGYTWVDPSDPRYCETHTLIFDDYVQGAQTPKSDEFE CCEEEEEEECCCCEECCCCCCCCCEEECCCCCCCEECEEEEEEHHHHCCCCCCCCCCCC CSERADLQPQDDNLLILGESGDVLEALTRVPELAEKYVGKVKLVYIDPPFNTAQTFASYE CHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH DNLEHSIWLTMMRDRLIHMKKLLTNDGSIWVHLDDVEVHRMRVLMDEVFGADRFIATVAW CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEE EKDKGRRNDTDISGAHDLILIYAPSGRQWKNVRNLLPRLASQDARYQNPDNDPRGPWLQG ECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC DNGTAKSGTEKNRFPVTLPSGRVVTPKGRYWRFSPEGLAEARADGRVWFGKDGDSLPVIK CCCCCCCCCCCCCCCEECCCCEEECCCCCEEEECCHHHHHHCCCCCEEECCCCCCCHHHH RYLTDVQTGLVPRTWWNADEAGHNQEAKRDHLNKMFPEVENPFSTPKPERLLERIIHIGS HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC NPGDIVLDVFAGSGTTAAVAQKMGRRWVTCELLESTFTTFTRPRLEKVVNDEDPGGITRT CCCCEEEEEECCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KGERVDATVDGLPDGVSPEDAAKFTSVLNKLIKDDPELKKSVEVKTLKAASKTKRTKEVV CCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH NWRGGGGFQVAHLSPACFDYDPALDRVMLTAAATGETLIESVAANLGFTLLHPDDDYVFD CCCCCCCEEEEECCCCCCCCCHHHHHEEHHHHCCHHHHHHHHHHHCCEEEECCCCCEEEE ARRGNALLKVVEGVATPQIVDWLASQIQPGETIVLAATTVMDGVRQHLRKAVKGSRVVAL CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEC PDDIFRYSEGGNK CHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]