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The map label for this gene is ybjZ [C]

Identifier: 38234455

GI number: 38234455

Start: 1927279

End: 1929843

Strand: Reverse

Name: ybjZ [C]

Synonym: DIP1885

Alternate gene names: 38234455

Gene position: 1929843-1927279 (Counterclockwise)

Preceding gene: 38234456

Following gene: 38234452

Centisome position: 77.55

GC content: 52.44

Gene sequence:

>2565_bases
ATGGGTTCGCATAGTACATCTACTGGCTCGAAAAACGCGATGTTGCGTTTGAGTCTGCGTTCGGTTGCGGCGCATAAGGT
TCGTCTTGCGTTGACGATTCTTGCGGTTGTGTTGGGTACGGCGTTTGTGTCGGGTTCGTTTATGTTCACGCAGTCGTTGA
GCAATACGTTTGATTCGGCGATTGATGATCAGTTGGCGAATGTCGACGTTGTGATGAGTGGCGAGAAGGCACCTATGCCT
CGCGGGCTTATCGACGAACTCCGCGAGGATAAAGATCATGTTGCGGCTGTCGCGGTTCAGGGTGCTACATCTGCGGTTCT
GGCTACTGAGGATCGCAAGGCTATTCAGACGGGTGCGGCTTCTCCTACGATCGGTATTTTTTACGGTGAGGGCAGTGCAG
CGACCACGCCGGAAAAGATCACCTCGGGTAAGGAACCTCATGAGGCTAACGAGGTGCTGGCACCGGAGAGTGCTGCTGAA
CTTGGTATTAAAGAAGGCTCCACAGTGGTGGTCGTCGATGAGGCTGGCCAGCGTGAGGTAAAGGTTGTGGGTACGTATTC
CACGGAGGCTACTGCTCATCCTGGTGTGAACCTGTTGATGGGGGAGAAGGCCTTTTTGGATCGTTACCAGCCGGAGTTTA
TTGGAACCATTTTTGTGAAGAAGGCTGATGGGTCTTCTGAGGATGTTGTTCAGTATCTGAAGGATAAGTACCCAGATTTC
AAGGTGGATACGGGTGCGTCGTTGGCTGAGGAGCTGACTAAGACGATTAAGAAGGCATTGAGCTTTGTTAATTACTTCTT
GGTTGCTTTCGGTTTGATTGCACTGCTGGTGGGCACCTTCATCATTGCTAATACTTTCTCGATGATTGTGGCGCAGCGTC
TCAAGGAATTTGCGCTTATGCGTGCGCTGGGTGTTTCGCGTAAGCAGTTGACGCGGTCTGTGGTTCTCGAGGCCGTGATT
GTGGGCATTATCGGTTCGGCAGTCGGTGTTGTTGCTGGCGCTGGATTGGTTAAGGTCATTCAGTTTGCGATGAAACAATT
CGGAATGGAGATTCCGAATGCGGGACTGGGGCTTTCTGCACAGTCGATTTTGGTACCGCTGGCGCTTGGTACTGTCGTCA
CGATTATTAGTGCGTGGGCTCCTGCTCGTCGCGCTGGTGCGGTTCGTCCTGTAGAAGCCATGCGATCGACGGAAAGCTCG
GCGGAATCTTCGCTTAAGGCGCGTACCATCGCTGGCGCTGTGGTGTTCTTGATTGGTTGTGCCGCAGCTGCGCTGGGTGC
CTTTAATGATGGCTCTGAGACGAAGACTCGTGCCATTTTGGTCGGAATTGGTGCTCTGTTTGTGATCGTGGGTGTGTTCT
TGGCATCACCTGCGATCTCTATTCCGGTTGTTGGTGGCTTGGGACGTATCGTTGGTGCACCGTTTAAGGCGGTGGGCAAG
CTTGCGGCGACGAACTCGCGTCGTAACCCACGTCGTACGGCCACTACGGCATTTGCATTGACTCTGGGCATTGCGCTGGT
CACCAGCATTGGTATGTTGTCGGCGACGATGAAGTCCAGCATTAGCGGATTGATCGATAGTGAGGTCAAGGCTGAGTTCA
TTTTGTCGGGCCCGACCAATGGTCGATTCCCTGTTCCTGCCGAGGCAGAAAAGAAGCTCAACGACACCAAGGGTGTTGGG
TCAGTTACTGCGTTGGAGGCTGCACCTGTTGCTATTGGTGAGGTGCCTCCGAATGCGCCGGAGCAGATGTTTAGTAGCCG
CTTGATGTCGGGCAACATTAATACGGTTGTTAGTGTGGAGGAGCCGCAGGGTGATTTCAATTTGGATCAGCCGAACGTTA
TCGTCGCAAAGCAGAGCTACTTGGATGAAAAGAAACTCAAGATCGGCGATACGGTTCCGGTGATTGATTCCAACCACAAT
GAAATTGCTAAGGCGAAAGTTGTGGGAAGCTTCAAAGAGAGCAAGGTTTTGGGCAATGTGATTTTGTCGGCCAAGACTTT
GGAGAACACCGGGGTGCAAAAGACCACGAACTCACTGTTTGTTAACGGTGACGGTTCTTTGAAGCCTGATGAGTTGAAGC
AGGAAATTGAGAAGGCCGTTGAGGATTTCTTGGTTGTTCGGGTTCAGACCGCCAAGGAGTTTGCTGGCGAGCAGGCATCT
ACGATTTCGCAGATGATGAATATCTTGTATGCGTTACTCGGATTAGCAGTCATTGTTGCCGTGATTGGCATTATTAATAC
TTTGGCGCTCAATGTGATTGAGCGTCGCCAAGAGATTGGTATGTTGCGTGCTGTGGGTACGCAGCGTGGTCAAATTCGAA
CGATGATCTCTATCGAGTCGGTTCAGATTGCCCTCTATGGTGCCGTAATGGGCATTGTTGTTGGCTTGGGTCTGGGCTGG
TCGTTCCTCAAGGTCTTGTCTAGCCAAGGCCTAGAAAACGTCAGTGTTCCGTGGTCGCAGATGGTGTGGCTCCTCGTGGG
CTCTGCTGTTGTTGGTGTGATCGCCGCAGTATGGCCGGCACGCCGTGCTGCCAAGACACCACCGCTGGACGCGATCGCTG
ACTAG

Upstream 100 bases:

>100_bases
TGTGGTGTTCTTGGCTGATGGTCGTATTGTCAAGGAGCTTATGCATCCGACAGCTGAGGAAATTTTGTCCACGATGGCAA
CCATTGAGGAGCTTGCATAG

Downstream 100 bases:

>100_bases
ATCTGAAGTCCACACCATACGGCCACCATTCCACCGAGGATGGTGGCCGTTGTGTATCCCAACAGCATTGCCCAACGTCG
CTGCCGTATGAGCGTGCCGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 853

Protein sequence:

>854_residues
MGSHSTSTGSKNAMLRLSLRSVAAHKVRLALTILAVVLGTAFVSGSFMFTQSLSNTFDSAIDDQLANVDVVMSGEKAPMP
RGLIDELREDKDHVAAVAVQGATSAVLATEDRKAIQTGAASPTIGIFYGEGSAATTPEKITSGKEPHEANEVLAPESAAE
LGIKEGSTVVVVDEAGQREVKVVGTYSTEATAHPGVNLLMGEKAFLDRYQPEFIGTIFVKKADGSSEDVVQYLKDKYPDF
KVDTGASLAEELTKTIKKALSFVNYFLVAFGLIALLVGTFIIANTFSMIVAQRLKEFALMRALGVSRKQLTRSVVLEAVI
VGIIGSAVGVVAGAGLVKVIQFAMKQFGMEIPNAGLGLSAQSILVPLALGTVVTIISAWAPARRAGAVRPVEAMRSTESS
AESSLKARTIAGAVVFLIGCAAAALGAFNDGSETKTRAILVGIGALFVIVGVFLASPAISIPVVGGLGRIVGAPFKAVGK
LAATNSRRNPRRTATTAFALTLGIALVTSIGMLSATMKSSISGLIDSEVKAEFILSGPTNGRFPVPAEAEKKLNDTKGVG
SVTALEAAPVAIGEVPPNAPEQMFSSRLMSGNINTVVSVEEPQGDFNLDQPNVIVAKQSYLDEKKLKIGDTVPVIDSNHN
EIAKAKVVGSFKESKVLGNVILSAKTLENTGVQKTTNSLFVNGDGSLKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQAS
TISQMMNILYALLGLAVIVAVIGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIESVQIALYGAVMGIVVGLGLGW
SFLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPARRAAKTPPLDAIAD

Sequences:

>Translated_854_residues
MGSHSTSTGSKNAMLRLSLRSVAAHKVRLALTILAVVLGTAFVSGSFMFTQSLSNTFDSAIDDQLANVDVVMSGEKAPMP
RGLIDELREDKDHVAAVAVQGATSAVLATEDRKAIQTGAASPTIGIFYGEGSAATTPEKITSGKEPHEANEVLAPESAAE
LGIKEGSTVVVVDEAGQREVKVVGTYSTEATAHPGVNLLMGEKAFLDRYQPEFIGTIFVKKADGSSEDVVQYLKDKYPDF
KVDTGASLAEELTKTIKKALSFVNYFLVAFGLIALLVGTFIIANTFSMIVAQRLKEFALMRALGVSRKQLTRSVVLEAVI
VGIIGSAVGVVAGAGLVKVIQFAMKQFGMEIPNAGLGLSAQSILVPLALGTVVTIISAWAPARRAGAVRPVEAMRSTESS
AESSLKARTIAGAVVFLIGCAAAALGAFNDGSETKTRAILVGIGALFVIVGVFLASPAISIPVVGGLGRIVGAPFKAVGK
LAATNSRRNPRRTATTAFALTLGIALVTSIGMLSATMKSSISGLIDSEVKAEFILSGPTNGRFPVPAEAEKKLNDTKGVG
SVTALEAAPVAIGEVPPNAPEQMFSSRLMSGNINTVVSVEEPQGDFNLDQPNVIVAKQSYLDEKKLKIGDTVPVIDSNHN
EIAKAKVVGSFKESKVLGNVILSAKTLENTGVQKTTNSLFVNGDGSLKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQAS
TISQMMNILYALLGLAVIVAVIGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIESVQIALYGAVMGIVVGLGLGW
SFLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPARRAAKTPPLDAIAD
>Mature_853_residues
GSHSTSTGSKNAMLRLSLRSVAAHKVRLALTILAVVLGTAFVSGSFMFTQSLSNTFDSAIDDQLANVDVVMSGEKAPMPR
GLIDELREDKDHVAAVAVQGATSAVLATEDRKAIQTGAASPTIGIFYGEGSAATTPEKITSGKEPHEANEVLAPESAAEL
GIKEGSTVVVVDEAGQREVKVVGTYSTEATAHPGVNLLMGEKAFLDRYQPEFIGTIFVKKADGSSEDVVQYLKDKYPDFK
VDTGASLAEELTKTIKKALSFVNYFLVAFGLIALLVGTFIIANTFSMIVAQRLKEFALMRALGVSRKQLTRSVVLEAVIV
GIIGSAVGVVAGAGLVKVIQFAMKQFGMEIPNAGLGLSAQSILVPLALGTVVTIISAWAPARRAGAVRPVEAMRSTESSA
ESSLKARTIAGAVVFLIGCAAAALGAFNDGSETKTRAILVGIGALFVIVGVFLASPAISIPVVGGLGRIVGAPFKAVGKL
AATNSRRNPRRTATTAFALTLGIALVTSIGMLSATMKSSISGLIDSEVKAEFILSGPTNGRFPVPAEAEKKLNDTKGVGS
VTALEAAPVAIGEVPPNAPEQMFSSRLMSGNINTVVSVEEPQGDFNLDQPNVIVAKQSYLDEKKLKIGDTVPVIDSNHNE
IAKAKVVGSFKESKVLGNVILSAKTLENTGVQKTTNSLFVNGDGSLKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQAST
ISQMMNILYALLGLAVIVAVIGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIESVQIALYGAVMGIVVGLGLGWS
FLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPARRAAKTPPLDAIAD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=141, Percent_Identity=29.0780141843972, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 89539; Mature: 89408

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSHSTSTGSKNAMLRLSLRSVAAHKVRLALTILAVVLGTAFVSGSFMFTQSLSNTFDSA
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDDQLANVDVVMSGEKAPMPRGLIDELREDKDHVAAVAVQGATSAVLATEDRKAIQTGAA
HHHHHCCEEEEECCCCCCCCHHHHHHHHCCHHHEEEEEECCCCCEEEECCCHHHHHCCCC
SPTIGIFYGEGSAATTPEKITSGKEPHEANEVLAPESAAELGIKEGSTVVVVDEAGQREV
CCEEEEEECCCCCCCCCHHHCCCCCCCCHHCCCCCCHHHHCCCCCCCEEEEEECCCCCEE
KVVGTYSTEATAHPGVNLLMGEKAFLDRYQPEFIGTIFVKKADGSSEDVVQYLKDKYPDF
EEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCC
KVDTGASLAEELTKTIKKALSFVNYFLVAFGLIALLVGTFIIANTFSMIVAQRLKEFALM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALGVSRKQLTRSVVLEAVIVGIIGSAVGVVAGAGLVKVIQFAMKQFGMEIPNAGLGLSA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCH
QSILVPLALGTVVTIISAWAPARRAGAVRPVEAMRSTESSAESSLKARTIAGAVVFLIGC
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAAALGAFNDGSETKTRAILVGIGALFVIVGVFLASPAISIPVVGGLGRIVGAPFKAVGK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHH
LAATNSRRNPRRTATTAFALTLGIALVTSIGMLSATMKSSISGLIDSEVKAEFILSGPTN
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GRFPVPAEAEKKLNDTKGVGSVTALEAAPVAIGEVPPNAPEQMFSSRLMSGNINTVVSVE
CCCCCCCHHHHHCCCCCCCCCEEEHHCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEE
EPQGDFNLDQPNVIVAKQSYLDEKKLKIGDTVPVIDSNHNEIAKAKVVGSFKESKVLGNV
CCCCCCCCCCCCEEEEEHHHCCCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
ILSAKTLENTGVQKTTNSLFVNGDGSLKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQAS
HHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TISQMMNILYALLGLAVIVAVIGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHH
VQIALYGAVMGIVVGLGLGWSFLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRAAKTPPLDAIAD
HHCCCCCCCHHCCC
>Mature Secondary Structure 
GSHSTSTGSKNAMLRLSLRSVAAHKVRLALTILAVVLGTAFVSGSFMFTQSLSNTFDSA
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IDDQLANVDVVMSGEKAPMPRGLIDELREDKDHVAAVAVQGATSAVLATEDRKAIQTGAA
HHHHHCCEEEEECCCCCCCCHHHHHHHHCCHHHEEEEEECCCCCEEEECCCHHHHHCCCC
SPTIGIFYGEGSAATTPEKITSGKEPHEANEVLAPESAAELGIKEGSTVVVVDEAGQREV
CCEEEEEECCCCCCCCCHHHCCCCCCCCHHCCCCCCHHHHCCCCCCCEEEEEECCCCCEE
KVVGTYSTEATAHPGVNLLMGEKAFLDRYQPEFIGTIFVKKADGSSEDVVQYLKDKYPDF
EEEEECCCCCCCCCCCEEEECCHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCC
KVDTGASLAEELTKTIKKALSFVNYFLVAFGLIALLVGTFIIANTFSMIVAQRLKEFALM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALGVSRKQLTRSVVLEAVIVGIIGSAVGVVAGAGLVKVIQFAMKQFGMEIPNAGLGLSA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCH
QSILVPLALGTVVTIISAWAPARRAGAVRPVEAMRSTESSAESSLKARTIAGAVVFLIGC
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
AAAALGAFNDGSETKTRAILVGIGALFVIVGVFLASPAISIPVVGGLGRIVGAPFKAVGK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHH
LAATNSRRNPRRTATTAFALTLGIALVTSIGMLSATMKSSISGLIDSEVKAEFILSGPTN
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GRFPVPAEAEKKLNDTKGVGSVTALEAAPVAIGEVPPNAPEQMFSSRLMSGNINTVVSVE
CCCCCCCHHHHHCCCCCCCCCEEEHHCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEEEE
EPQGDFNLDQPNVIVAKQSYLDEKKLKIGDTVPVIDSNHNEIAKAKVVGSFKESKVLGNV
CCCCCCCCCCCCEEEEEHHHCCCHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
ILSAKTLENTGVQKTTNSLFVNGDGSLKPDELKQEIEKAVEDFLVVRVQTAKEFAGEQAS
HHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TISQMMNILYALLGLAVIVAVIGIINTLALNVIERRQEIGMLRAVGTQRGQIRTMISIES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHH
VQIALYGAVMGIVVGLGLGWSFLKVLSSQGLENVSVPWSQMVWLLVGSAVVGVIAAVWPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RRAAKTPPLDAIAD
HHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]