| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234431
Identifier: 38234431
GI number: 38234431
Start: 1904274
End: 1905374
Strand: Direct
Name: 38234431
Synonym: DIP1861
Alternate gene names: NA
Gene position: 1904274-1905374 (Clockwise)
Preceding gene: 38234430
Following gene: 38234436
Centisome position: 76.52
GC content: 54.5
Gene sequence:
>1101_bases ATGAACACCACAGGGGAAACCACACAACCGTTCTACAGTCACTGCGACATGAACGACCCACTTTGCCGCGCCGAACGACT ACGCACCCAATTCGACTACTACCGCTGGCACAGCCTACAACCCGATGACAACGACGACGTTGACACCTACACCACAGACA TCGCCACCCGCATCGGCAAAACCCAACGCTACGTCTGCGACCACCTCGACGCCATCTACTACCTCACCCAACTCCCACAA CTCCACACTGTCTACCAACAACTCTGGCACCTCGACGACACCCGACTCATCGCCATCACCAGAATCATCTCCGCACTACC TACCACCTACTATGACGCCATCGACACCCACCTGACACGCTGGCTCACACCCACCCAACCAGCACAAACCATCCCCAGTA CCAGAGCCATTACCCGATTCCTACGCAAAACCATCACCCACCTCGGCTTTCATCTCGACAACACCCGAAAACCAGAACAA TACGTCTACATCTACGACGCCGGACACGGACTCGCAGGTATTGACGCCCTCATCCACGCCGGTGTTGCAGAAATGTTCGA GACCACCTTGCGTAGCATCAAAAAGACCCATAGCTGCGACGACTCTACAGCTCTGCAACTTCTCCTAGAAGATAAAACCA GTGTGGTGATCAACGTCTATGACACCGGCACGGGGATCACCTACACCCCGCAGGGAACAGCTCTGCCTCAGGTGCCTGAG CATCTTGTTATTCGTGTGCTCGGTGACGCTGATGTGGCGGTGTCGACTGGTTATCGGTTTACAGAGGCAATGCGCAGGTT TATTCAAGGCCGTGATGGGGTGTGTCGTTTCCCTGGTTGTGGGGTGCCGGCGCAGTGGTGCGATATTGACCATGTTGAAG AATATGATCTTGGTGGGGTTACCGGTGCGGTTAACGCTCAGTGTTTATGTCGGCATCATCACAATGTGAAAACGTCTCGT CGGGTCGATTGTGAGATTGGTGCCGGTGGTGTGGTGACGTGGCAGATCGGTGATCGTAGGGTGGTTACCACACCGGAAGG GGTGCTAGCGGGGCAAACGTTTAGGCAACGCAGAGAAAAGAAAATCAAAAAAGCAGCATAG
Upstream 100 bases:
>100_bases TCACTTCTTAAGTTACCCCCATTTGTTCGAATGCTCTTTCGGATATCAAGCCCCTGCGATACACTCGCAACCAACATGAA CAACCAGGGGGCTACACATC
Downstream 100 bases:
>100_bases GTAACGCCACAACCGTCAATGAGCTAGGAGCAACTTCTGTAAAACCCGCATCAATCACATGAACAGCACCTGGCTGCTCT GCTGCTTTACGGAACACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MNTTGETTQPFYSHCDMNDPLCRAERLRTQFDYYRWHSLQPDDNDDVDTYTTDIATRIGKTQRYVCDHLDAIYYLTQLPQ LHTVYQQLWHLDDTRLIAITRIISALPTTYYDAIDTHLTRWLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQ YVYIYDAGHGLAGIDALIHAGVAEMFETTLRSIKKTHSCDDSTALQLLLEDKTSVVINVYDTGTGITYTPQGTALPQVPE HLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCGVPAQWCDIDHVEEYDLGGVTGAVNAQCLCRHHHNVKTSR RVDCEIGAGGVVTWQIGDRRVVTTPEGVLAGQTFRQRREKKIKKAA
Sequences:
>Translated_366_residues MNTTGETTQPFYSHCDMNDPLCRAERLRTQFDYYRWHSLQPDDNDDVDTYTTDIATRIGKTQRYVCDHLDAIYYLTQLPQ LHTVYQQLWHLDDTRLIAITRIISALPTTYYDAIDTHLTRWLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQ YVYIYDAGHGLAGIDALIHAGVAEMFETTLRSIKKTHSCDDSTALQLLLEDKTSVVINVYDTGTGITYTPQGTALPQVPE HLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCGVPAQWCDIDHVEEYDLGGVTGAVNAQCLCRHHHNVKTSR RVDCEIGAGGVVTWQIGDRRVVTTPEGVLAGQTFRQRREKKIKKAA >Mature_366_residues MNTTGETTQPFYSHCDMNDPLCRAERLRTQFDYYRWHSLQPDDNDDVDTYTTDIATRIGKTQRYVCDHLDAIYYLTQLPQ LHTVYQQLWHLDDTRLIAITRIISALPTTYYDAIDTHLTRWLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQ YVYIYDAGHGLAGIDALIHAGVAEMFETTLRSIKKTHSCDDSTALQLLLEDKTSVVINVYDTGTGITYTPQGTALPQVPE HLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCGVPAQWCDIDHVEEYDLGGVTGAVNAQCLCRHHHNVKTSR RVDCEIGAGGVVTWQIGDRRVVTTPEGVLAGQTFRQRREKKIKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 41416; Mature: 41416
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTGETTQPFYSHCDMNDPLCRAERLRTQFDYYRWHSLQPDDNDDVDTYTTDIATRIGK CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC TQRYVCDHLDAIYYLTQLPQLHTVYQQLWHLDDTRLIAITRIISALPTTYYDAIDTHLTR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH WLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQYVYIYDAGHGLAGIDALIHA HCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH GVAEMFETTLRSIKKTHSCDDSTALQLLLEDKTSVVINVYDTGTGITYTPQGTALPQVPE HHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCEEEEEEEECCCCEEECCCCCCCCCCCH HLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCGVPAQWCDIDHVEEYDLGGV HHEEEEECCCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCC TGAVNAQCLCRHHHNVKTSRRVDCEIGAGGVVTWQIGDRRVVTTPEGVLAGQTFRQRREK CCCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCCHHCCHHHHHHHHH KIKKAA HHHHCC >Mature Secondary Structure MNTTGETTQPFYSHCDMNDPLCRAERLRTQFDYYRWHSLQPDDNDDVDTYTTDIATRIGK CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC TQRYVCDHLDAIYYLTQLPQLHTVYQQLWHLDDTRLIAITRIISALPTTYYDAIDTHLTR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHH WLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQYVYIYDAGHGLAGIDALIHA HCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH GVAEMFETTLRSIKKTHSCDDSTALQLLLEDKTSVVINVYDTGTGITYTPQGTALPQVPE HHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCCEEEEEEEECCCCEEECCCCCCCCCCCH HLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCGVPAQWCDIDHVEEYDLGGV HHEEEEECCCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCC TGAVNAQCLCRHHHNVKTSRRVDCEIGAGGVVTWQIGDRRVVTTPEGVLAGQTFRQRREK CCCCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCCHHCCHHHHHHHHH KIKKAA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]