| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234396
Identifier: 38234396
GI number: 38234396
Start: 1871192
End: 1872241
Strand: Direct
Name: 38234396
Synonym: DIP1825
Alternate gene names: NA
Gene position: 1871192-1872241 (Clockwise)
Preceding gene: 38234395
Following gene: 38234397
Centisome position: 75.19
GC content: 60.0
Gene sequence:
>1050_bases ATGGGAATTTTTGAGACAATGAGCCAGGTCCGCCGCTTGCCGCAAGCACTGGCCGCGGCGGTGGCAACCCCGCCCGCGCT GGCAGGGTCCGGCACCTTGCGCGGCCTAATCGGTCTAGATGATTCCCTAGGCGAAGCGGTCACCACGCGCGCGGAAGCGC TGACCATACCCGCGGTTTTGCGCGCGCGGAATCTGCTGAGCACCACGGTTGCACGCACGCCGCTAGTGTGCGACGGCACT TTACCGCCGTTCGTACCAGTGGCGGCCCCGCCGGGCGCGGCCACCATGCAAACACCATTCCACAGAATGCTGGCCACAGC GGACGATTTACTTTTCAACGGCGTTGCTTGCTGGGCACTGGACCGCGACGAATCCGGCACCTGCATAGGCGCAATCCATA TTCCGCTGGATACCTGGCAGATTGAAGAAAACACAGTCCGGGTGAACGGCAAGGCCGTTGACCCTATGGAGGTGTGCATT TTCGTTGGCATCCACGGCGGTCTGCTCACACACGCCAGTGAGACTTTCACCGACGCGCGCAATTTGGTGCGCGCCGCCGC CCGCGTTGCACAGAACCCCGCCGCCCTCATTGAGCTAAGGCAGACCAATAACGCACAGCTAAGCCCGGACGATGTGGACC GAATCATTAACGGATATGTGGCCGCCCGCCGCGGCCGCAATTCCGGCGTGGGCTTTAGTTCGTCTGGCCTAGAAGTGCAT GAGCACGAAATGGCTAAGGAAAATCTGTTGATTGAGGGGCGCAACGCCGCCGCCGTTGACGTTGCCCGCGCAATGAACGT TCCCGCCGCCTTTATTGACGCCACGGTAGGCGGGACCTCGCTGAGCTATCAGAACGCAGCCAGCCGCATGATTGAGCTAG TCACATTTGGCGTTGAGCCGCTTATGAGCGCGATTGAAGCCAGGCTAAACCAACCGGATATGCACGCTGATCATCTCGCA AACCCGCTCAAGTTCGACCCCGCTGCCTTGCTAGATGCAATCCCTACCACACCAACAATTGGAGCACAACCACATGGAGA AAATTCTTAG
Upstream 100 bases:
>100_bases GACCCCGAAGCATGGCTAAGGGCACGCGCCGCGCGGCGTAAATGTGCAGCTAGAAGCCGTTAACCGTGATTTGTCCACCC TTGCCGCCATCATGTGACAC
Downstream 100 bases:
>100_bases ATACTCCCGCGACCAAGTGAAGCAGGACACACCCTATAACTGTTGCCCCGCGTCTGCTCAAACAATCATACTTGCCGCAA CCGGCGTTATGGTGAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MGIFETMSQVRRLPQALAAAVATPPALAGSGTLRGLIGLDDSLGEAVTTRAEALTIPAVLRARNLLSTTVARTPLVCDGT LPPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWALDRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCI FVGIHGGLLTHASETFTDARNLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVH EHEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGGTSLSYQNAASRMIELVTFGVEPLMSAIEARLNQPDMHADHLA NPLKFDPAALLDAIPTTPTIGAQPHGENS
Sequences:
>Translated_349_residues MGIFETMSQVRRLPQALAAAVATPPALAGSGTLRGLIGLDDSLGEAVTTRAEALTIPAVLRARNLLSTTVARTPLVCDGT LPPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWALDRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCI FVGIHGGLLTHASETFTDARNLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVH EHEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGGTSLSYQNAASRMIELVTFGVEPLMSAIEARLNQPDMHADHLA NPLKFDPAALLDAIPTTPTIGAQPHGENS >Mature_348_residues GIFETMSQVRRLPQALAAAVATPPALAGSGTLRGLIGLDDSLGEAVTTRAEALTIPAVLRARNLLSTTVARTPLVCDGTL PPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWALDRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCIF VGIHGGLLTHASETFTDARNLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVHE HEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGGTSLSYQNAASRMIELVTFGVEPLMSAIEARLNQPDMHADHLAN PLKFDPAALLDAIPTTPTIGAQPHGENS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36781; Mature: 36650
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFETMSQVRRLPQALAAAVATPPALAGSGTLRGLIGLDDSLGEAVTTRAEALTIPAVL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH RARNLLSTTVARTPLVCDGTLPPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWAL HHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE DRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCIFVGIHGGLLTHASETFTDAR CCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCHHHEEEEEECCCCHHHHHHHHHHHHH NLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVH HHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EHEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGGTSLSYQNAASRMIELVTFGVEP HHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHH LMSAIEARLNQPDMHADHLANPLKFDPAALLDAIPTTPTIGAQPHGENS HHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure GIFETMSQVRRLPQALAAAVATPPALAGSGTLRGLIGLDDSLGEAVTTRAEALTIPAVL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH RARNLLSTTVARTPLVCDGTLPPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWAL HHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE DRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCIFVGIHGGLLTHASETFTDAR CCCCCCCEEEEEEECCCCEEECCCEEEECCCCCCHHHEEEEEECCCCHHHHHHHHHHHHH NLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVH HHHHHHHHHHCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EHEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGGTSLSYQNAASRMIELVTFGVEP HHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHH LMSAIEARLNQPDMHADHLANPLKFDPAALLDAIPTTPTIGAQPHGENS HHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA