| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234373
Identifier: 38234373
GI number: 38234373
Start: 1850457
End: 1850900
Strand: Reverse
Name: 38234373
Synonym: DIP1802
Alternate gene names: NA
Gene position: 1850900-1850457 (Counterclockwise)
Preceding gene: 38234374
Following gene: 38234372
Centisome position: 74.37
GC content: 56.31
Gene sequence:
>444_bases ATGAGCACTGAATCTTCCCACCAAGTTCACACCGCTACCGTCCCTGTTCGCTGGACGGATTTTGACCGCTTTGGTCACGT GACAAACTCCGCCTATGTGGACCTCGCCCAAGAGGCTCGCACTGTGTGGGCAAATGACAACTTTGCTGTCAAGGGACACC AGATTCCCGCGGTCTTTGTCCGTCACATCGAAGTGGACTATCTTCGCCCCATCATGCCGAGCACCTCGCAGGTAGTGGTA GAAACCGAAGTTGTGCATATCGGCAACACATCCTTTACCACCCGCCAGCACCTTAAAGACGGCGAAGGCCACGTATGCGC CACCGTTATCGCTGTTCAGGTAGCCGTGGACATGTTGACCACACGGCCACGTGCCATTGCCGCCCACGAGCTCCAAGTAC TCACACAGTTTGCGGCCTCGACACAACAGGAGTCCGAGCAGTAG
Upstream 100 bases:
>100_bases TTTTCCGAGGTGGCTTTTGTGTTTTAGGTAACACGCTGGTCTAGATACTATTGTGGACTAAACGACTTTTAGGATTGTAG AAAGTACACGGCAAATTTCA
Downstream 100 bases:
>100_bases CTTTGTGCTATGAGTAATTCCTCGGTATCCCTGACAGTTCAGTCAGGACAGTCCGGTTTAACATCCCTGCTGCAACGCGC AGTGGGGCTCGACGCCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl-CoA Thioester Hydrolase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSTESSHQVHTATVPVRWTDFDRFGHVTNSAYVDLAQEARTVWANDNFAVKGHQIPAVFVRHIEVDYLRPIMPSTSQVVV ETEVVHIGNTSFTTRQHLKDGEGHVCATVIAVQVAVDMLTTRPRAIAAHELQVLTQFAASTQQESEQ
Sequences:
>Translated_147_residues MSTESSHQVHTATVPVRWTDFDRFGHVTNSAYVDLAQEARTVWANDNFAVKGHQIPAVFVRHIEVDYLRPIMPSTSQVVV ETEVVHIGNTSFTTRQHLKDGEGHVCATVIAVQVAVDMLTTRPRAIAAHELQVLTQFAASTQQESEQ >Mature_146_residues STESSHQVHTATVPVRWTDFDRFGHVTNSAYVDLAQEARTVWANDNFAVKGHQIPAVFVRHIEVDYLRPIMPSTSQVVVE TEVVHIGNTSFTTRQHLKDGEGHVCATVIAVQVAVDMLTTRPRAIAAHELQVLTQFAASTQQESEQ
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16348; Mature: 16217
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTESSHQVHTATVPVRWTDFDRFGHVTNSAYVDLAQEARTVWANDNFAVKGHQIPAVFV CCCCCCCEEEEEEEEEEECCHHHHCCCCCHHHHHHHHHHHEEECCCCEEEECCCCHHHHH RHIEVDYLRPIMPSTSQVVVETEVVHIGNTSFTTRQHLKDGEGHVCATVIAVQVAVDMLT HHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH TRPRAIAAHELQVLTQFAASTQQESEQ CCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STESSHQVHTATVPVRWTDFDRFGHVTNSAYVDLAQEARTVWANDNFAVKGHQIPAVFV CCCCCCEEEEEEEEEEECCHHHHCCCCCHHHHHHHHHHHEEECCCCEEEECCCCHHHHH RHIEVDYLRPIMPSTSQVVVETEVVHIGNTSFTTRQHLKDGEGHVCATVIAVQVAVDMLT HHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH TRPRAIAAHELQVLTQFAASTQQESEQ CCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA