| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is nadD [H]
Identifier: 38234346
GI number: 38234346
Start: 1818773
End: 1819459
Strand: Reverse
Name: nadD [H]
Synonym: DIP1775
Alternate gene names: 38234346
Gene position: 1819459-1818773 (Counterclockwise)
Preceding gene: 38234347
Following gene: 38234345
Centisome position: 73.11
GC content: 56.48
Gene sequence:
>687_bases ATGACACTGCCACGCCAACCCAGCCGCATCGGCATCATGGGTGGAACCTTCGATCCGATTCACCATGGGCACCTCGTTGC TGCAAGCGAGGTTGCGGCACGGTTTGATCTGGAACTGGTGGTTTTTGTTCCCACTGGCCAGCCGTGGCAAAAAGTCGACC GCGAGGTTTCTCCGGCGGAGGATCGTTACTTAATGACGGTCATTGCTACGGCCTCCAATCCGCGTTTTACGGTCAGCCGA GTAGATATTGATCGCCCAGGTGCGACCTACACCATCGATACCCTGCGAGATCTGCGCTGCGCCTACCCCGATTCGGAGTT GTTCTTCATCACAGGTGCTGATGCCCTAGGTCGGATACTGACGTGGCGGGACTGGGAAAAGGCGTTGGAGATCGCAACCT TCGTAGGCGTGACACGTCCAGGTTATGTGCTAGAAGAGGACATGCTGCCTGCGCAGTATCACGATCGTGTGGAATTAATC GAGATCCCTGCCATGGCGATTTCGTCCACGGGGTGTCGTCGACGCGCCAAAGAAGGGCTGCCGGTGTGGTACCTAGTTCC CGATGGAGTGGTGCAATACATCGCAAAACGACAGCTGTATCACCCAAGCGGAGTAGATGAGAAACGTAATCCCGCGGGTG CGGCAGCGTCGCGGTTAGCTTTTGACCGCGATAACGTGGAACAATAG
Upstream 100 bases:
>100_bases CCCGCGGCCCGATGGCGTTGCCGGAGCTGACCACCACGAAGTGGATTGTCCAGGGCACGGGTCAAACACGTCCGTAGTGC ACTGCTAGAATTTCACGGTT
Downstream 100 bases:
>100_bases CCACGATAAGAAAGGATCTTTAGTGACTGCTACGCACGACACCATTCGCTTGGCCGAGATCGCTGCCAAAGCCGCAGCGG AGAAGCTGGCTACCAACATC
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTLPRQPSRIGIMGGTFDPIHHGHLVAASEVAARFDLELVVFVPTGQPWQKVDREVSPAEDRYLMTVIATASNPRFTVSR VDIDRPGATYTIDTLRDLRCAYPDSELFFITGADALGRILTWRDWEKALEIATFVGVTRPGYVLEEDMLPAQYHDRVELI EIPAMAISSTGCRRRAKEGLPVWYLVPDGVVQYIAKRQLYHPSGVDEKRNPAGAAASRLAFDRDNVEQ
Sequences:
>Translated_228_residues MTLPRQPSRIGIMGGTFDPIHHGHLVAASEVAARFDLELVVFVPTGQPWQKVDREVSPAEDRYLMTVIATASNPRFTVSR VDIDRPGATYTIDTLRDLRCAYPDSELFFITGADALGRILTWRDWEKALEIATFVGVTRPGYVLEEDMLPAQYHDRVELI EIPAMAISSTGCRRRAKEGLPVWYLVPDGVVQYIAKRQLYHPSGVDEKRNPAGAAASRLAFDRDNVEQ >Mature_227_residues TLPRQPSRIGIMGGTFDPIHHGHLVAASEVAARFDLELVVFVPTGQPWQKVDREVSPAEDRYLMTVIATASNPRFTVSRV DIDRPGATYTIDTLRDLRCAYPDSELFFITGADALGRILTWRDWEKALEIATFVGVTRPGYVLEEDMLPAQYHDRVELIE IPAMAISSTGCRRRAKEGLPVWYLVPDGVVQYIAKRQLYHPSGVDEKRNPAGAAASRLAFDRDNVEQ
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=208, Percent_Identity=32.2115384615385, Blast_Score=101, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR019450 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF10362 DUF2432 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 25539; Mature: 25408
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPRQPSRIGIMGGTFDPIHHGHLVAASEVAARFDLELVVFVPTGQPWQKVDREVSPAE CCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCCC DRYLMTVIATASNPRFTVSRVDIDRPGATYTIDTLRDLRCAYPDSELFFITGADALGRIL CCEEEEEEEECCCCCEEEEEEECCCCCCEEECCCHHHHHHCCCCCCEEEEECCHHHHHHH TWRDWEKALEIATFVGVTRPGYVLEEDMLPAQYHDRVELIEIPAMAISSTGCRRRAKEGL CHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCEEEEEECHHHHCCCCHHHHHHCCC PVWYLVPDGVVQYIAKRQLYHPSGVDEKRNPAGAAASRLAFDRDNVEQ CEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure TLPRQPSRIGIMGGTFDPIHHGHLVAASEVAARFDLELVVFVPTGQPWQKVDREVSPAE CCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCCC DRYLMTVIATASNPRFTVSRVDIDRPGATYTIDTLRDLRCAYPDSELFFITGADALGRIL CCEEEEEEEECCCCCEEEEEEECCCCCCEEECCCHHHHHHCCCCCCEEEEECCHHHHHHH TWRDWEKALEIATFVGVTRPGYVLEEDMLPAQYHDRVELIEIPAMAISSTGCRRRAKEGL CHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHCCCEEEEEECHHHHCCCCHHHHHHCCC PVWYLVPDGVVQYIAKRQLYHPSGVDEKRNPAGAAASRLAFDRDNVEQ CEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]