| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234333
Identifier: 38234333
GI number: 38234333
Start: 1806618
End: 1807301
Strand: Direct
Name: 38234333
Synonym: DIP1762
Alternate gene names: NA
Gene position: 1806618-1807301 (Clockwise)
Preceding gene: 38234332
Following gene: 38234336
Centisome position: 72.59
GC content: 48.54
Gene sequence:
>684_bases ATGAAACACTATATAAAGCTTCCTGCGCTATTCACCGCAGCTGTTTTCTTCGTTGTAGCGTGCAGTACTCCGAGCGAAAA CGAGTCAAAGCCCCCTCAAACAACTGTGGTGACTGTTACGCCAACACCTACTGAAAATAAACCGGTTCCTTCCGAGGAAG CAGCCAACTCCGATTCCACCGGTAAAAACAAAATTATCCCAGTAGAAGCTTTAGATTCGGTATGGGTCCCTGCACTATGC GATGACCAAGCTGGCAACCTTGTCGGCGGGGTGTTACCAGAATCTCTTCAAGCATGGCCATCTCCTTCGGGATTAACCAA AAAAGAAGATGACACGCCCATTGGTGCATACACGGACATCAACGGTGATGGTCGAGACGAAGCAATCTTGGCTTACTACT GCGATCGCGGCAGCGTATCGTGGCCCGATAACATTCTGATCTACGATAACGACCTTAATTACCTCACCAAATTAGATCGT GAGCAATTTAGTCTCGGCGGTTATTCGATTGAACGAAGAAACATCAGGTCCATGTCGTGGGATGATAACAGCGTAACTAT CGAAAGTTACGGCTGGGCACAAGATGACGTAGCGGCCGCGCCATCCGCAATCCTGACCTACCGCCTCACTATGCCTAACG GTGTACCTCAGGTTGAGTTAATCGATCAACGACCAAGTTCATAA
Upstream 100 bases:
>100_bases TGTTAACTCAGATAACATGCGGTACCCGTCAGATACCGGTATGCCTCTTGGCGCGCTGCGTCTCGAAGAAGCACCGGATA TTCGAATTGAGGAGCTCTAA
Downstream 100 bases:
>100_bases CTACTACCGCAGGAAAGAGCACGGATGATCATCCGTGCTCTGCCGTTTTTGTCAAGTGAGAACTAGGATTTGCGCAGCTA GGATAGTTCGCTCACACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKHYIKLPALFTAAVFFVVACSTPSENESKPPQTTVVTVTPTPTENKPVPSEEAANSDSTGKNKIIPVEALDSVWVPALC DDQAGNLVGGVLPESLQAWPSPSGLTKKEDDTPIGAYTDINGDGRDEAILAYYCDRGSVSWPDNILIYDNDLNYLTKLDR EQFSLGGYSIERRNIRSMSWDDNSVTIESYGWAQDDVAAAPSAILTYRLTMPNGVPQVELIDQRPSS
Sequences:
>Translated_227_residues MKHYIKLPALFTAAVFFVVACSTPSENESKPPQTTVVTVTPTPTENKPVPSEEAANSDSTGKNKIIPVEALDSVWVPALC DDQAGNLVGGVLPESLQAWPSPSGLTKKEDDTPIGAYTDINGDGRDEAILAYYCDRGSVSWPDNILIYDNDLNYLTKLDR EQFSLGGYSIERRNIRSMSWDDNSVTIESYGWAQDDVAAAPSAILTYRLTMPNGVPQVELIDQRPSS >Mature_227_residues MKHYIKLPALFTAAVFFVVACSTPSENESKPPQTTVVTVTPTPTENKPVPSEEAANSDSTGKNKIIPVEALDSVWVPALC DDQAGNLVGGVLPESLQAWPSPSGLTKKEDDTPIGAYTDINGDGRDEAILAYYCDRGSVSWPDNILIYDNDLNYLTKLDR EQFSLGGYSIERRNIRSMSWDDNSVTIESYGWAQDDVAAAPSAILTYRLTMPNGVPQVELIDQRPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24774; Mature: 24774
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYIKLPALFTAAVFFVVACSTPSENESKPPQTTVVTVTPTPTENKPVPSEEAANSDST CCCEEECHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCC GKNKIIPVEALDSVWVPALCDDQAGNLVGGVLPESLQAWPSPSGLTKKEDDTPIGAYTDI CCCEEEEHHHHCCCCCCEECCCCCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC NGDGRDEAILAYYCDRGSVSWPDNILIYDNDLNYLTKLDREQFSLGGYSIERRNIRSMSW CCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHCHHHHCCCCEEEECCCCCCCCC DDNSVTIESYGWAQDDVAAAPSAILTYRLTMPNGVPQVELIDQRPSS CCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure MKHYIKLPALFTAAVFFVVACSTPSENESKPPQTTVVTVTPTPTENKPVPSEEAANSDST CCCEEECHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCC GKNKIIPVEALDSVWVPALCDDQAGNLVGGVLPESLQAWPSPSGLTKKEDDTPIGAYTDI CCCEEEEHHHHCCCCCCEECCCCCCCEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC NGDGRDEAILAYYCDRGSVSWPDNILIYDNDLNYLTKLDREQFSLGGYSIERRNIRSMSW CCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHCHHHHCCCCEEEECCCCCCCCC DDNSVTIESYGWAQDDVAAAPSAILTYRLTMPNGVPQVELIDQRPSS CCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA