| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is dcp [H]
Identifier: 38234299
GI number: 38234299
Start: 1768327
End: 1770306
Strand: Reverse
Name: dcp [H]
Synonym: DIP1728
Alternate gene names: 38234299
Gene position: 1770306-1768327 (Counterclockwise)
Preceding gene: 38234301
Following gene: 38234298
Centisome position: 71.14
GC content: 53.18
Gene sequence:
>1980_bases ATGACTAATCCTTTGCTTCAACCTTCCACCTTGCCGTACCAATTACCGCAATTTGCGGCAATTCGAGTAGAGCATTATCT CCCAGCTTTTACTGAGGCACTTGCACGCCACAGTGCGGAAATTGCTGCGATTGCGAACAATCCAGAACCTGCCACGTGGG AAAATACGGTTGAGGAGCTCGAGCGAAGCGGTCGCGATTTGGAACGAGTGGCGGCAGTCTTTTTTAACTTGCATGGCACG GATTCCAGTGCAGAAATGGATGAGATTGCAGCTGAGATTGCCCCACGGCTTGCCCAGCATTCGGATGAGATGTATCTCAA CGCTGAGCTGTTCGAAAGAATTAAGCAATGCACACCACCAGCGGATTCAGAGTCGCAGCGTTTGCATGAGCACATTATCA GGACATTTACTCGCCACGGTGCTGGCCTAGAAGACGTTGCACGTTTGAAAGAAATAAATGCGCGGTTGTCGGTGCTCTCG GATATGTTTGGCCGTAATTTATTAGAGTCCACGCAGAAATTAGCTGTGGGTTTTTCCTCGAAAGAGGAGCTCGCGGGGCT AAGTGATGCTCGCATTGAGTCGGCTGCCGCTGATGCGAAAGCATTGGGACGCGACGGCTATGTGCTTCCGCTAGAGCTGC CGACGGTCCAAGGCGAACAGAGCTCGCTAGAGAATCCGCAGTCTCGGCAGCGGGTATATGAGGCGTCGCAACGCAGAGGC GCTGATAACAATCCTGAGGTGCTCGTGGAAATGGTGCAGCTACGGGCCGAGCGGGCCGAATTGTTGGGATACCTAACCCA CGCGGACTATGTGATTTCTGAAGAAACCGCCGGAAGCGCCGAAGCTGCGCGAAAGCTTCTTTACGATTTGGCACCCGCGG CGACCGCAAATGCGCTGGCGGAAAAGAAGCTGCTGTCGGAGGCTGCAGGAGAAGAGATCAATCCTGCAGATTGGCCGTAC TGGGAATCTCACGTACGTCTGCGCGATTATGCGCTCAACGAGGAAGAACTATCACAGCATTTCCCGTTGAAGAAAGTGCT TGTCGACGGAGTCTTCTTCGCCGCACATCGCCTCTACGGTATTACTGTGGAGCCTCGTCCCGACTTAGAAGGCTACGCCC CTGGTGTCGATGTGTGGGAAGTTAAAGAAGAAGATGGCCGTGGTATCGGGCTATTGCTGACTGATTACTACGGGCGGCCG TCGAAACGCGGTGGTGCTTGGATGAGTAGCTTTGTCGATCAATCGGAGTTGTTGGGTACAAAGCCTGTTGTGGTCAACGT TATGGGGTTGACGGCACCAACCGATGGTTCGGATGCACTGCTCAGTATCGATTCGTTGACCACCGTCTTCCACGAGTTTG GTCACGCGCTGCATGGTTTGCTTTCGCAAGTGCGTTACCCAACGTTTTCTGGCACAAACGTGCCACGCGACTACGTGGAG TTTCCATCGCAGATCAATGAAAACTGGGCGTTTGAGCCAGAAGTATTGCGTAACTATGCGCCGAATCTTCCTGCACATGT GGTTGACGCTATTGAAGAAGCCCGCCAGTTTGGTCAAGGATTCGCCACAACTGAATACCTTGCTGCGGCGATCATTGATC TCGCGTGGCATTCGTTGACCAGCGCACAAGCTCAAAAGTTGTCGGCCTCAGACATAGAAGAATTTGAACGTCGTGCACTC GAAGACGCCGGAATCGAAGGCGTACAACCTCGCTACAAGTCCACCTACTTTAATCACATTTTCGCAGGTGGATACTCTGC TGGGTACTACTCCTATCTTTGGGCCGAAGCGCTTGATGCGGATGGATTTGACTGGTTCAAGGAACAACAAGACCCCCGCG TTGCCGGACGACGATTCCGTGATCTTGTACTTTCACGCGGTGGTGCCGACGACTTCACTGAGGCCTATGAATCACTTCGT GGTCGCGAAAAAGATGTCGCACCACTGCTACGTCGCAGGGGCCTATCGGGAGCCATGTGA
Upstream 100 bases:
>100_bases GACGGCGTCGAAACGCGCTGCGTTGCCGTGGATGGTTCCGGTGTACGGTCCCATGGTGATCTGCTCGGACATGGCGTTAA CTTTAGTACGATTGCACTTT
Downstream 100 bases:
>100_bases TGTCCATCTTTGACACCCCCAGCCAGATACTCACCACAGCACCACTGTGGATTCAAACCCCTGTGGTGCTGATCGTGGCC GTGCCATTGTGCGCGGCGCT
Product: putative peptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MTNPLLQPSTLPYQLPQFAAIRVEHYLPAFTEALARHSAEIAAIANNPEPATWENTVEELERSGRDLERVAAVFFNLHGT DSSAEMDEIAAEIAPRLAQHSDEMYLNAELFERIKQCTPPADSESQRLHEHIIRTFTRHGAGLEDVARLKEINARLSVLS DMFGRNLLESTQKLAVGFSSKEELAGLSDARIESAAADAKALGRDGYVLPLELPTVQGEQSSLENPQSRQRVYEASQRRG ADNNPEVLVEMVQLRAERAELLGYLTHADYVISEETAGSAEAARKLLYDLAPAATANALAEKKLLSEAAGEEINPADWPY WESHVRLRDYALNEEELSQHFPLKKVLVDGVFFAAHRLYGITVEPRPDLEGYAPGVDVWEVKEEDGRGIGLLLTDYYGRP SKRGGAWMSSFVDQSELLGTKPVVVNVMGLTAPTDGSDALLSIDSLTTVFHEFGHALHGLLSQVRYPTFSGTNVPRDYVE FPSQINENWAFEPEVLRNYAPNLPAHVVDAIEEARQFGQGFATTEYLAAAIIDLAWHSLTSAQAQKLSASDIEEFERRAL EDAGIEGVQPRYKSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFKEQQDPRVAGRRFRDLVLSRGGADDFTEAYESLR GREKDVAPLLRRRGLSGAM
Sequences:
>Translated_659_residues MTNPLLQPSTLPYQLPQFAAIRVEHYLPAFTEALARHSAEIAAIANNPEPATWENTVEELERSGRDLERVAAVFFNLHGT DSSAEMDEIAAEIAPRLAQHSDEMYLNAELFERIKQCTPPADSESQRLHEHIIRTFTRHGAGLEDVARLKEINARLSVLS DMFGRNLLESTQKLAVGFSSKEELAGLSDARIESAAADAKALGRDGYVLPLELPTVQGEQSSLENPQSRQRVYEASQRRG ADNNPEVLVEMVQLRAERAELLGYLTHADYVISEETAGSAEAARKLLYDLAPAATANALAEKKLLSEAAGEEINPADWPY WESHVRLRDYALNEEELSQHFPLKKVLVDGVFFAAHRLYGITVEPRPDLEGYAPGVDVWEVKEEDGRGIGLLLTDYYGRP SKRGGAWMSSFVDQSELLGTKPVVVNVMGLTAPTDGSDALLSIDSLTTVFHEFGHALHGLLSQVRYPTFSGTNVPRDYVE FPSQINENWAFEPEVLRNYAPNLPAHVVDAIEEARQFGQGFATTEYLAAAIIDLAWHSLTSAQAQKLSASDIEEFERRAL EDAGIEGVQPRYKSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFKEQQDPRVAGRRFRDLVLSRGGADDFTEAYESLR GREKDVAPLLRRRGLSGAM >Mature_658_residues TNPLLQPSTLPYQLPQFAAIRVEHYLPAFTEALARHSAEIAAIANNPEPATWENTVEELERSGRDLERVAAVFFNLHGTD SSAEMDEIAAEIAPRLAQHSDEMYLNAELFERIKQCTPPADSESQRLHEHIIRTFTRHGAGLEDVARLKEINARLSVLSD MFGRNLLESTQKLAVGFSSKEELAGLSDARIESAAADAKALGRDGYVLPLELPTVQGEQSSLENPQSRQRVYEASQRRGA DNNPEVLVEMVQLRAERAELLGYLTHADYVISEETAGSAEAARKLLYDLAPAATANALAEKKLLSEAAGEEINPADWPYW ESHVRLRDYALNEEELSQHFPLKKVLVDGVFFAAHRLYGITVEPRPDLEGYAPGVDVWEVKEEDGRGIGLLLTDYYGRPS KRGGAWMSSFVDQSELLGTKPVVVNVMGLTAPTDGSDALLSIDSLTTVFHEFGHALHGLLSQVRYPTFSGTNVPRDYVEF PSQINENWAFEPEVLRNYAPNLPAHVVDAIEEARQFGQGFATTEYLAAAIIDLAWHSLTSAQAQKLSASDIEEFERRALE DAGIEGVQPRYKSTYFNHIFAGGYSAGYYSYLWAEALDADGFDWFKEQQDPRVAGRRFRDLVLSRGGADDFTEAYESLRG REKDVAPLLRRRGLSGAM
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=644, Percent_Identity=28.1055900621118, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI14149738, Length=642, Percent_Identity=27.7258566978193, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI156105687, Length=578, Percent_Identity=23.7024221453287, Blast_Score=103, Evalue=6e-22, Organism=Escherichia coli, GI1787819, Length=680, Percent_Identity=38.3823529411765, Blast_Score=443, Evalue=1e-125, Organism=Escherichia coli, GI1789913, Length=689, Percent_Identity=30.9143686502177, Blast_Score=296, Evalue=3e-81, Organism=Caenorhabditis elegans, GI32565901, Length=499, Percent_Identity=24.0480961923848, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319793, Length=614, Percent_Identity=25.5700325732899, Blast_Score=167, Evalue=6e-42, Organism=Drosophila melanogaster, GI21356111, Length=694, Percent_Identity=22.1902017291066, Blast_Score=126, Evalue=6e-29, Organism=Drosophila melanogaster, GI20129717, Length=401, Percent_Identity=27.1820448877805, Blast_Score=105, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 73238; Mature: 73107
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPLLQPSTLPYQLPQFAAIRVEHYLPAFTEALARHSAEIAAIANNPEPATWENTVEEL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH ERSGRDLERVAAVFFNLHGTDSSAEMDEIAAEIAPRLAQHSDEMYLNAELFERIKQCTPP HHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCC ADSESQRLHEHIIRTFTRHGAGLEDVARLKEINARLSVLSDMFGRNLLESTQKLAVGFSS CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEELAGLSDARIESAAADAKALGRDGYVLPLELPTVQGEQSSLENPQSRQRVYEASQRRG HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHCC ADNNPEVLVEMVQLRAERAELLGYLTHADYVISEETAGSAEAARKLLYDLAPAATANALA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHH EKKLLSEAAGEEINPADWPYWESHVRLRDYALNEEELSQHFPLKKVLVDGVFFAAHRLYG HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHEE ITVEPRPDLEGYAPGVDVWEVKEEDGRGIGLLLTDYYGRPSKRGGAWMSSFVDQSELLGT EEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC KPVVVNVMGLTAPTDGSDALLSIDSLTTVFHEFGHALHGLLSQVRYPTFSGTNVPRDYVE CCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH FPSQINENWAFEPEVLRNYAPNLPAHVVDAIEEARQFGQGFATTEYLAAAIIDLAWHSLT CHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SAQAQKLSASDIEEFERRALEDAGIEGVQPRYKSTYFNHIFAGGYSAGYYSYLWAEALDA HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DGFDWFKEQQDPRVAGRRFRDLVLSRGGADDFTEAYESLRGREKDVAPLLRRRGLSGAM CCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TNPLLQPSTLPYQLPQFAAIRVEHYLPAFTEALARHSAEIAAIANNPEPATWENTVEEL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH ERSGRDLERVAAVFFNLHGTDSSAEMDEIAAEIAPRLAQHSDEMYLNAELFERIKQCTPP HHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCC ADSESQRLHEHIIRTFTRHGAGLEDVARLKEINARLSVLSDMFGRNLLESTQKLAVGFSS CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEELAGLSDARIESAAADAKALGRDGYVLPLELPTVQGEQSSLENPQSRQRVYEASQRRG HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHCC ADNNPEVLVEMVQLRAERAELLGYLTHADYVISEETAGSAEAARKLLYDLAPAATANALA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCHHHHHHHH EKKLLSEAAGEEINPADWPYWESHVRLRDYALNEEELSQHFPLKKVLVDGVFFAAHRLYG HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHEE ITVEPRPDLEGYAPGVDVWEVKEEDGRGIGLLLTDYYGRPSKRGGAWMSSFVDQSELLGT EEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC KPVVVNVMGLTAPTDGSDALLSIDSLTTVFHEFGHALHGLLSQVRYPTFSGTNVPRDYVE CCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH FPSQINENWAFEPEVLRNYAPNLPAHVVDAIEEARQFGQGFATTEYLAAAIIDLAWHSLT CHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SAQAQKLSASDIEEFERRALEDAGIEGVQPRYKSTYFNHIFAGGYSAGYYSYLWAEALDA HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DGFDWFKEQQDPRVAGRRFRDLVLSRGGADDFTEAYESLRGREKDVAPLLRRRGLSGAM CCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]