Click here to switch to the map view.

The map label for this gene is 38234237

Identifier: 38234237

GI number: 38234237

Start: 1700446

End: 1700982

Strand: Reverse

Name: 38234237

Synonym: DIP1664

Alternate gene names: NA

Gene position: 1700982-1700446 (Counterclockwise)

Preceding gene: 38234238

Following gene: 38234234

Centisome position: 68.35

GC content: 54.0

Gene sequence:

>537_bases
ATGCCTACACCGGATTTTGTACTTCAACTGCGGGAAAAGATCGGCAACGATCCGCTATTTTTACCTGGGGTTACCGCCGT
TGTTATTAAGGATGTTCCAGAAGGAGCACCAATTACCGCTGTCCCAGAAGTGCTGCTTGTTAAGCGAGCTGATAATGGCG
AATGGACGCCAGTAACCGGAATCGTCGATCCCGGCGAGCAACCACACAGTGCAGCTGTACGCGAAGTTAAGGAAGAAACT
GGCCTTGACGTCACCGTGGAAGCACTGCTTGGAGTAGGTGCTGTAGGGCCAGTTACCTACCCTAATGGGGATGTTTCGCA
CTACATGGATACCGCCATGCGGTGTGAAGTTGTAGGAGACAGCACCCCACGTATCGGTGACGACGAAAACACCGAGGTGC
GATGGTTCTCTGTGATGCAAATGCCTCCGATGAAACCACGTTTTAGGTTGGTTGTCGGAGACGCCGTAGCCCAGTTGCGG
CGGCCAGAAGGCTTCCGGCCGCGCATGGGATACGAAAAACGAGAACGACGCCGCTAG

Upstream 100 bases:

>100_bases
AGAAGCAGCGTTACGCCAGCAGAACGAAACCAATGCACTGGATGAGGCAGACTCTCCAGAGCAACAATAACTTTTAAAGA
ATTGAAGGAATATTTCCACG

Downstream 100 bases:

>100_bases
GCAGCTACCGCGATATGGCGAACACCTGGTAGATGGGCTCGCCATGCGGTGGTAACCGCAATCAAACATGCGAGTGCGAG
CACGGTGCCTACTGAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPTPDFVLQLREKIGNDPLFLPGVTAVVIKDVPEGAPITAVPEVLLVKRADNGEWTPVTGIVDPGEQPHSAAVREVKEET
GLDVTVEALLGVGAVGPVTYPNGDVSHYMDTAMRCEVVGDSTPRIGDDENTEVRWFSVMQMPPMKPRFRLVVGDAVAQLR
RPEGFRPRMGYEKRERRR

Sequences:

>Translated_178_residues
MPTPDFVLQLREKIGNDPLFLPGVTAVVIKDVPEGAPITAVPEVLLVKRADNGEWTPVTGIVDPGEQPHSAAVREVKEET
GLDVTVEALLGVGAVGPVTYPNGDVSHYMDTAMRCEVVGDSTPRIGDDENTEVRWFSVMQMPPMKPRFRLVVGDAVAQLR
RPEGFRPRMGYEKRERRR
>Mature_177_residues
PTPDFVLQLREKIGNDPLFLPGVTAVVIKDVPEGAPITAVPEVLLVKRADNGEWTPVTGIVDPGEQPHSAAVREVKEETG
LDVTVEALLGVGAVGPVTYPNGDVSHYMDTAMRCEVVGDSTPRIGDDENTEVRWFSVMQMPPMKPRFRLVVGDAVAQLRR
PEGFRPRMGYEKRERRR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 19659; Mature: 19528

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPDFVLQLREKIGNDPLFLPGVTAVVIKDVPEGAPITAVPEVLLVKRADNGEWTPVTG
CCCHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEC
IVDPGEQPHSAAVREVKEETGLDVTVEALLGVGAVGPVTYPNGDVSHYMDTAMRCEVVGD
EECCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEECC
STPRIGDDENTEVRWFSVMQMPPMKPRFRLVVGDAVAQLRRPEGFRPRMGYEKRERRR
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
PTPDFVLQLREKIGNDPLFLPGVTAVVIKDVPEGAPITAVPEVLLVKRADNGEWTPVTG
CCHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEC
IVDPGEQPHSAAVREVKEETGLDVTVEALLGVGAVGPVTYPNGDVSHYMDTAMRCEVVGD
EECCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEECC
STPRIGDDENTEVRWFSVMQMPPMKPRFRLVVGDAVAQLRRPEGFRPRMGYEKRERRR
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]