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The map label for this gene is ydjX [C]

Identifier: 38233859

GI number: 38233859

Start: 1282382

End: 1283083

Strand: Direct

Name: ydjX [C]

Synonym: DIP1274

Alternate gene names: 38233859

Gene position: 1282382-1283083 (Clockwise)

Preceding gene: 38233854

Following gene: 38233860

Centisome position: 51.53

GC content: 44.59

Gene sequence:

>702_bases
GTGAGTGCGATTTTCTCTTATTTTCTTGAGCTTTTTCGTGATGGATTCAACACGATTTCAGAGTGGAGCACTGTTAAGAA
ACTTGGTTTTACGTTACTATGCTGCGTTTTTCTTGCAGCAACTGTGATTATCGACGTTCCTCCGCTAACTGTTCTACGTA
CTTGGGCGGACAATACTGGCGCGTGGTTTGTTGTGGTTTTTACTGCCTTATATATTTCAATAACGCAGTTTCCGATACCA
CGCACACTCTTGACGCTTTCTTCTGGAATTCTTTTCGGCCCATTGGCCGGAATTGTCATCGCCCTGTTAAGCACAACAGC
GTCGGCCATGCTGTCATTACTCATCGTCCGAAGAATTCTGGGTGATTGGACTCGATCGCGGTTAACATCCGCCAATGCTG
TTCGCGTAAATCATCACATTGAGCAACGTGGTTGGTTTGCAGTTGCATCGCTGCGAATGATCGCTGCGGTGCCCTTTTCG
TTATTGAATTATGTAGCAGGAATGACGAACATCTCTTTAATAAGTTTCGGGTTGGCTACTTGCATCGGGTCTACACCTGG
GACAATTGTTACAGTTTTCATTGGAAATGGGCTTGCGCAAAGCTACGATGCAACCCTTTTTATCCCGACTATATGTTTAG
CAATCCTCGGTTTATGTGGATTAATTATCGATTCGAGACTGCTAGTCAAGTCATCAACATAG

Upstream 100 bases:

>100_bases
TGATAGGCGCCTCATAACAAGTACTAAGTGTAGTCCGATACATCAGTATTTGGTGAACATTTCCAACCGAATGTGTCCGA
TCGGACTAAAGTTAGCCCAC

Downstream 100 bases:

>100_bases
ACATTAAGGTAGGGTGTTGAACTAATACTATGGTGCTTTAATCGAGAGGATCATTCAGGAATGTACGCTATCCAAGCTCG
GTACCGAGGTCGAGAACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIIDVPPLTVLRTWADNTGAWFVVVFTALYISITQFPIP
RTLLTLSSGILFGPLAGIVIALLSTTASAMLSLLIVRRILGDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFS
LLNYVAGMTNISLISFGLATCIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLIIDSRLLVKSST

Sequences:

>Translated_233_residues
MSAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIIDVPPLTVLRTWADNTGAWFVVVFTALYISITQFPIP
RTLLTLSSGILFGPLAGIVIALLSTTASAMLSLLIVRRILGDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFS
LLNYVAGMTNISLISFGLATCIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLIIDSRLLVKSST
>Mature_232_residues
SAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIIDVPPLTVLRTWADNTGAWFVVVFTALYISITQFPIPR
TLLTLSSGILFGPLAGIVIALLSTTASAMLSLLIVRRILGDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFSL
LNYVAGMTNISLISFGLATCIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLIIDSRLLVKSST

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=192, Percent_Identity=25, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25172; Mature: 25041

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIIDVPPLTVLRTWADNTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
AWFVVVFTALYISITQFPIPRTLLTLSSGILFGPLAGIVIALLSTTASAMLSLLIVRRIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFSLLNYVAGMTNISLISFGLAT
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLIIDSRLLVKSST
HHCCCCCCEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEECCC
>Mature Secondary Structure 
SAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIIDVPPLTVLRTWADNTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
AWFVVVFTALYISITQFPIPRTLLTLSSGILFGPLAGIVIALLSTTASAMLSLLIVRRIL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFSLLNYVAGMTNISLISFGLAT
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLIIDSRLLVKSST
HHCCCCCCEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]