| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is sglT [H]
Identifier: 38233607
GI number: 38233607
Start: 985407
End: 987065
Strand: Direct
Name: sglT [H]
Synonym: DIP1012
Alternate gene names: 38233607
Gene position: 985407-987065 (Clockwise)
Preceding gene: 38233606
Following gene: 38233608
Centisome position: 39.6
GC content: 52.56
Gene sequence:
>1659_bases ATGGATACCGCATTGAGGCTAGACGCGACGTGGGTCGATTACCTGCTTGTCGCCTTGTACTTTGTATTTGTTTTGGGCAT CGGATGGGCCGCGAAAGCACGTGTGTCCTCCTCCATTGATTTCTTCCTATCTGGGCGCGGGCTGCCAGCTTGGGTCACAG GTCTTGCCTTTGTCTCCGCCAACTTAGGCGCTGTGGAGATCATCGGCATGTCGGCTAACGGCGTGCAATATGGTTTCCAA ACCATGCACTATTTCTGGATCGGCGCAGTACCTGCCATGGTGTTCCTAGGAATCGTGATGATGCCGTTCTACTACGGCTC CAAGGTTCGCTCGGTTCCTGAATTTATGCGCCGCCGATTCGGTAGCGCAGCTCACTTGGTCAATGCTGTGTCCTTCGCTG TGGCACAGCTGCTGATCGCCGGTGTAAACCTCTTCCTCCTAGCGAAGGTTGTCAACGCACTTCTCGGTTGGCCGCTGTGG GTCGCCCTCGTATTGGCCGCGGTCATTGTGTTGTCGTACATCACTTTGGGCGGTTTGTCTGCCGCGATCTATAACGAGGT GCTGCAGTTCTTTGTCATTCTTGCCATGCTGCTTCCTATCACCATCATTGGTCTTAATCGAGTAGGAGGGTGGCAGGGCC TAAAGGAACAGGTTGCTATCGAGCACAACTTCCACACGTGGCCAGGCGTAGAGATTTCGGGTTTTGATAACCCAGTGATC TCGGTGATTGGTATTACCTTTGGCTTGGGCTTTGTGCTGTCATTTGGTTATTGGACTACCAACTTCGTTGAGGTGCAACG TGCTATGGCATCGGAGTCGATCTCTGCTGCTCGCAAGACTCCGATTATCGGTGCGTTTCCTAAGATGTTTGTTCCATTCC TCGTGGTGCTTCCAGGTATGGTCGCATCGGTCACTGTTGCTGAGCTGATTGGTGATAATCCTGCCGGCAAGCCTAACGAC GCCATCTTGTATCTCATGCGTGACCTTCTTCCCAACGGTCTGTTGGGCGTTGCTATTGCAGGTCTGTTGGCCTCGTTCAT GGCTGGTATGGCCGCTAACATCTCGGCATTTAACACCGTGATCTCTTATGACATTTGGCAAACCTATGTGATCAAAGATC GCGAAGATGACTACTACCTCAAGTTCGGACGCCTTGCCACTGTTGCCGCCACCTTGATCGCAGTGTTTACTGCGTTGCTT GCCCAGAACTTTGGCAACATCATGGATTATCTGCAAACACTGTTTGGCTTTTTTAACGCACCACTGTTTGCCACCTTCAT TTTGGGTATGTTCTGGAAGCGCATGACTCCTCACGCAGGTTGGACCGGCCTTGTGGCAGGTACTGCGTCGGCAATCTTCT ACTGGTACTTGGCTACCTTTACTGAATCTTCTGCAACGCTGCTTAATCTGCCAGGACAAGGCACCGCATTCGTCGCTGCC GGTATCGCGTTTAGCGTCGACATCCTCGTCTCCGTGATCGTTACCATGTTCACCCAGCCGAAGCCGGATCACGAGCTGGT GGGCTTTGTAAAGTCTGTTACCCCAAAGGACCATTTCGAGGACCATTCCGAAGACGGCCAGCCGTGGTACCGCCGCACCG TTCCACTAGGAATGCTGTGCTTAATCTTGGTCATCGCTCTCAACGTTATCTTTGCCTAG
Upstream 100 bases:
>100_bases GATCGGCGCGGCATCTCCGTGGCACGGAACGATCACGATTTCCGCATATAACAAGCACTCTTAACCAGCATTAAAAATCA ACAACATAAGGATGATCCTC
Downstream 100 bases:
>100_bases GAGGAGAGGAAAATGCATAAAAATACAACGCAGACACCAGCGGGATCACACACTCACCTCGCCGGCGCATTTGATATCAG AAATGTCATCGGAGCATTGA
Product: putative sodium:solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSGRGLPAWVTGLAFVSANLGAVEIIGMSANGVQYGFQ TMHYFWIGAVPAMVFLGIVMMPFYYGSKVRSVPEFMRRRFGSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLW VALVLAAVIVLSYITLGGLSAAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEHNFHTWPGVEISGFDNPVI SVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTPIIGAFPKMFVPFLVVLPGMVASVTVAELIGDNPAGKPND AILYLMRDLLPNGLLGVAIAGLLASFMAGMAANISAFNTVISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTALL AQNFGNIMDYLQTLFGFFNAPLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLATFTESSATLLNLPGQGTAFVAA GIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKDHFEDHSEDGQPWYRRTVPLGMLCLILVIALNVIFA
Sequences:
>Translated_552_residues MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSGRGLPAWVTGLAFVSANLGAVEIIGMSANGVQYGFQ TMHYFWIGAVPAMVFLGIVMMPFYYGSKVRSVPEFMRRRFGSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLW VALVLAAVIVLSYITLGGLSAAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEHNFHTWPGVEISGFDNPVI SVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTPIIGAFPKMFVPFLVVLPGMVASVTVAELIGDNPAGKPND AILYLMRDLLPNGLLGVAIAGLLASFMAGMAANISAFNTVISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTALL AQNFGNIMDYLQTLFGFFNAPLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLATFTESSATLLNLPGQGTAFVAA GIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKDHFEDHSEDGQPWYRRTVPLGMLCLILVIALNVIFA >Mature_552_residues MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSGRGLPAWVTGLAFVSANLGAVEIIGMSANGVQYGFQ TMHYFWIGAVPAMVFLGIVMMPFYYGSKVRSVPEFMRRRFGSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLW VALVLAAVIVLSYITLGGLSAAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEHNFHTWPGVEISGFDNPVI SVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTPIIGAFPKMFVPFLVVLPGMVASVTVAELIGDNPAGKPND AILYLMRDLLPNGLLGVAIAGLLASFMAGMAANISAFNTVISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTALL AQNFGNIMDYLQTLFGFFNAPLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLATFTESSATLLNLPGQGTAFVAA GIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKDHFEDHSEDGQPWYRRTVPLGMLCLILVIALNVIFA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=557, Percent_Identity=25.4937163375224, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI17941285, Length=453, Percent_Identity=27.1523178807947, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI4507031, Length=567, Percent_Identity=24.5149911816578, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI110835708, Length=571, Percent_Identity=26.6199649737303, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI109659836, Length=463, Percent_Identity=25.4859611231102, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI4507033, Length=560, Percent_Identity=25.3571428571429, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI206597483, Length=565, Percent_Identity=25.1327433628319, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI109659839, Length=479, Percent_Identity=25.0521920668058, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI206597487, Length=589, Percent_Identity=24.2784380305603, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256985183, Length=479, Percent_Identity=24.2171189979123, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI4507035, Length=430, Percent_Identity=24.1860465116279, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI157671931, Length=460, Percent_Identity=21.9565217391304, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI167466278, Length=472, Percent_Identity=24.1525423728814, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1790113, Length=518, Percent_Identity=23.9382239382239, Blast_Score=114, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32566512, Length=362, Percent_Identity=22.9281767955801, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24645928, Length=451, Percent_Identity=23.7250554323725, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24651739, Length=466, Percent_Identity=20.8154506437768, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362054, Length=458, Percent_Identity=24.235807860262, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI281362052, Length=458, Percent_Identity=24.235807860262, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI281362050, Length=458, Percent_Identity=24.235807860262, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24648056, Length=458, Percent_Identity=24.235807860262, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI21356827, Length=458, Percent_Identity=24.235807860262, Blast_Score=89, Evalue=9e-18, Organism=Drosophila melanogaster, GI24641117, Length=512, Percent_Identity=22.4609375, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI281362918, Length=458, Percent_Identity=20.7423580786026, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24651741, Length=444, Percent_Identity=20.2702702702703, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI221459584, Length=452, Percent_Identity=21.6814159292035, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573698, Length=467, Percent_Identity=19.4860813704497, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24650192, Length=422, Percent_Identity=21.0900473933649, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI221459582, Length=413, Percent_Identity=20.8232445520581, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221459588, Length=437, Percent_Identity=20.3661327231121, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221459586, Length=450, Percent_Identity=19.7777777777778, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 60075; Mature: 60075
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSGRGLPAWVTGLAFVSA CCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHEEECCCCHHHHHHHHHHHC NLGAVEIIGMSANGVQYGFQTMHYFWIGAVPAMVFLGIVMMPFYYGSKVRSVPEFMRRRF CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLWVALVLAAVIVLSYITLGGLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH AAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEHNFHTWPGVEISGFDNPVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCHHH SVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTPIIGAFPKMFVPFLVVLPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VASVTVAELIGDNPAGKPNDAILYLMRDLLPNGLLGVAIAGLLASFMAGMAANISAFNTV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTALLAQNFGNIMDYLQTLFGFFNA HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLATFTESSATLLNLPGQGTAFVAA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH GIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKDHFEDHSEDGQPWYRRTVPLGMLC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCHHHHH LILVIALNVIFA HHHHHHHHHHCC >Mature Secondary Structure MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSGRGLPAWVTGLAFVSA CCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHEEECCCCHHHHHHHHHHHC NLGAVEIIGMSANGVQYGFQTMHYFWIGAVPAMVFLGIVMMPFYYGSKVRSVPEFMRRRF CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH GSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLWVALVLAAVIVLSYITLGGLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH AAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEHNFHTWPGVEISGFDNPVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCHHH SVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTPIIGAFPKMFVPFLVVLPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VASVTVAELIGDNPAGKPNDAILYLMRDLLPNGLLGVAIAGLLASFMAGMAANISAFNTV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTALLAQNFGNIMDYLQTLFGFFNA HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLATFTESSATLLNLPGQGTAFVAA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHH GIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKDHFEDHSEDGQPWYRRTVPLGMLC HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCHHHHH LILVIALNVIFA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]