| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233588
Identifier: 38233588
GI number: 38233588
Start: 963385
End: 964062
Strand: Reverse
Name: 38233588
Synonym: DIP0993
Alternate gene names: NA
Gene position: 964062-963385 (Counterclockwise)
Preceding gene: 38233592
Following gene: 38233586
Centisome position: 38.74
GC content: 57.08
Gene sequence:
>678_bases ATGTCGCCACCACAATCCCCTCCTCCTAGACATACACTGTCGATTGTGAACGCTCCATCAGACTTTATTCGCAACTACAT TGACTCCACGACCGACGTGAGTGACGCTTTAGCCACCGCGCGCGAGGATGCGCAGGAATTTGGGCTCCATGTCCCCGATT CCATTACGGGCCAGCTGTTGACCACGTTGGCGGGGGTATCGCGCGCCCACGGCGCTATTGCGGTTACCCCAGCAGCGAGT GTGGTGGGCCTCCACCTCCTAGCCGGCCTTGGCGAAAAAGGCATCTTGACGTGTATCGATCCGGAGCCTGAGCACCAAAA ACGCGCCAAGAAAGCTTTCCGCGACGCGGGCTATGGTTCCTCACGGATTAGGTTTTTGCCCTCTCGTCCACTGGATGTGA TGGGACGATTAGCACGAGGCCAGTATCAGGTCATTTTCGGCGAAGTAGCACCTCTTGACCTTCGCGCATTTATCGACGCT TCCCTGCCGCTGCTTGCCAGCGGCGGCGTCCTAGTTCTACCTGGCGCGCTTCTCGACGGCACCGTGGCTGATTCCACGCG CAAAGATCGAGAAACGGTTGCAGCTCGTGAGGCAGATGATTATGTTCGCAACCTCGATGAGGTTGTCGTGTGCCGCCTTC CACTAGGAGGGGGAACAACACTTATTACCAAGCTTTAA
Upstream 100 bases:
>100_bases AGGCTGGCAACGCATAATTGTTCTCAGATTGTGACCTTATGGTGATCTGTTTGCAGCATTCACACTGTTAACAGGCGTCA CAACCTTTGATGTTGGGCCC
Downstream 100 bases:
>100_bases TGCTCGGTGGAAACCACAGAGGGAGGCGTCGACAAGCAATCGATGCCTCCCGTAGGTTTTATACGACGAAGTTCTTACCG ACGACTACCACGCCACCTGG
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQEFGLHVPDSITGQLLTTLAGVSRAHGAIAVTPAAS VVGLHLLAGLGEKGILTCIDPEPEHQKRAKKAFRDAGYGSSRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDA SLPLLASGGVLVLPGALLDGTVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLITKL
Sequences:
>Translated_225_residues MSPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQEFGLHVPDSITGQLLTTLAGVSRAHGAIAVTPAAS VVGLHLLAGLGEKGILTCIDPEPEHQKRAKKAFRDAGYGSSRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDA SLPLLASGGVLVLPGALLDGTVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLITKL >Mature_224_residues SPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQEFGLHVPDSITGQLLTTLAGVSRAHGAIAVTPAASV VGLHLLAGLGEKGILTCIDPEPEHQKRAKKAFRDAGYGSSRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDAS LPLLASGGVLVLPGALLDGTVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLITKL
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 23855; Mature: 23723
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQEFGLHVPDSITGQLL CCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH TTLAGVSRAHGAIAVTPAASVVGLHLLAGLGEKGILTCIDPEPEHQKRAKKAFRDAGYGS HHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC SRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDASLPLLASGGVLVLPGALLDG CEEEECCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEECCCEEEECCHHHCC TVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLITKL CCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEEEEEC >Mature Secondary Structure SPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQEFGLHVPDSITGQLL CCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH TTLAGVSRAHGAIAVTPAASVVGLHLLAGLGEKGILTCIDPEPEHQKRAKKAFRDAGYGS HHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC SRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDASLPLLASGGVLVLPGALLDG CEEEECCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEECCCEEEECCHHHCC TVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLITKL CCCCCCHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA