| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233574
Identifier: 38233574
GI number: 38233574
Start: 950252
End: 951226
Strand: Reverse
Name: 38233574
Synonym: DIP0979
Alternate gene names: NA
Gene position: 951226-950252 (Counterclockwise)
Preceding gene: 38233575
Following gene: 38233573
Centisome position: 38.22
GC content: 62.05
Gene sequence:
>975_bases ATGACTTCAGCACTAGCAACAGGACTTGCCACCATCACCGCCGACGGCACCGTGCTCGACGCCTGGTTCCCAGCGCCAGA GCTCACCGCCGTCGACACCACCGGCACCACAGTATTAGACGGTGACGACATCCCTGAGCACCTCCGCCTCCTAGTCGGCG AAGACGCAGATCGCGGGGTGCGTCGACAAGCGATCACCACAACGATCGCTGACCTCGATGCCGCCCCCATCGACGCCTAC GACGCCTACCTACGTCTTCACCTTCTCTCGCACCGCCTGGTCAAGCCACACGGCCAAAACCTCGACGGAATCTTCGGACT GCTCACCAACGTCGTATGGACCAACCACGGCCCCTGCGAAGTAAAAAACTTCGACATCACCCGCGCCAAACTCCAAGCAC GCGGCCCTGTCACCGTCTACCTCGTTGACAAATTCCCACGCATGGTCGATTACGTCCTCCCCAGCGGCGTGCGCATCGGC GACGCAGACCGCGTCCGCCTCGGCGCACACCTCGCCGAAGGCACCACCGTCATGCACGAAGGATTCGTCAACTTCAACGC AGGCACACTCGGCAACTCCATGGTCGAAGGCCGAATCTCCGCAGGCGTCGTCGTCGACGACGGATCCGACGTCGGCGGCG GAGCCTCCATCATGGGCACACTCTCCGGCGGCGGCAAACAAGTCATCTCACTAGGAAAACGCTGCCTCCTAGGCGCAAAC TCCGGATGTGGCATCCCACTCGGCGACGACTGCGTCATCGAAGCCGGCCTCTACGTCACCGCAGGTTCCAAAATCATCGT CCGCGGCGCCGTAGCAGAAGCCACCGGCCTCAACGACGGCGACACCACCAAAGCCCTCGAACTCGCCGGAGCCAACAACA TCCTCTTCCGACGCAACTCCATCAGCGGTGCCATCGAAGCAACCGCGTGGAAATCCCAAGCAGTCGAACTCAACGACGCG CTCCACGCAAACTAA
Upstream 100 bases:
>100_bases GACGCCTCCCGCAGCCAGATCACCTCCGTTACGGTCGTATTCCTCCTACTCATAGTCGTGTCATTCTTCACCAAGAAAAA GAGTAAGTAGACTTCCACCC
Downstream 100 bases:
>100_bases CCGCACACCACCAAGGGAGCCCCTCCTAGAGAGCGGCTCCCTTTTTTACCGCAGAAAAAACACATGACCGAACACACCGC CCCAACCCTCACAAAAGGGC
Product: putative succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIPEHLRLLVGEDADRGVRRQAITTTIADLDAAPIDAY DAYLRLHLLSHRLVKPHGQNLDGIFGLLTNVVWTNHGPCEVKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIG DADRVRLGAHLAEGTTVMHEGFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKQVISLGKRCLLGAN SGCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGDTTKALELAGANNILFRRNSISGAIEATAWKSQAVELNDA LHAN
Sequences:
>Translated_324_residues MTSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIPEHLRLLVGEDADRGVRRQAITTTIADLDAAPIDAY DAYLRLHLLSHRLVKPHGQNLDGIFGLLTNVVWTNHGPCEVKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIG DADRVRLGAHLAEGTTVMHEGFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKQVISLGKRCLLGAN SGCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGDTTKALELAGANNILFRRNSISGAIEATAWKSQAVELNDA LHAN >Mature_323_residues TSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIPEHLRLLVGEDADRGVRRQAITTTIADLDAAPIDAYD AYLRLHLLSHRLVKPHGQNLDGIFGLLTNVVWTNHGPCEVKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIGD ADRVRLGAHLAEGTTVMHEGFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKQVISLGKRCLLGANS GCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGDTTKALELAGANNILFRRNSISGAIEATAWKSQAVELNDAL HAN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 33781; Mature: 33649
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIPEHLRLLVGEDADRGV CCCHHHHCEEEEEECCEEEEEECCCCCEEEECCCCCEEECCCCCHHHHHEEECCCCCCCH RRQAITTTIADLDAAPIDAYDAYLRLHLLSHRLVKPHGQNLDGIFGLLTNVVWTNHGPCE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE VKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIGDADRVRLGAHLAEGTTVMHE EECCCEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEECCCCCEEECEEECCCCEEEEC GFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKQVISLGKRCLLGAN CEEEECCCCCCCHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHCCCEEEECC SGCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGDTTKALELAGANNILFRRNS CCCCCCCCCCEEEECCEEEEECCEEEEEECCHHHCCCCCCCCCEEEEECCCCCEEEEECC ISGAIEATAWKSQAVELNDALHAN CCCCEEEEECCCCCEEECCCCCCC >Mature Secondary Structure TSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIPEHLRLLVGEDADRGV CCHHHHCEEEEEECCEEEEEECCCCCEEEECCCCCEEECCCCCHHHHHEEECCCCCCCH RRQAITTTIADLDAAPIDAYDAYLRLHLLSHRLVKPHGQNLDGIFGLLTNVVWTNHGPCE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCE VKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIGDADRVRLGAHLAEGTTVMHE EECCCEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEECCCCCEEECEEECCCCEEEEC GFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKQVISLGKRCLLGAN CEEEECCCCCCCHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHCCCEEEECC SGCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGDTTKALELAGANNILFRRNS CCCCCCCCCCEEEECCEEEEECCEEEEEECCHHHCCCCCCCCCEEEEECCCCCEEEEECC ISGAIEATAWKSQAVELNDALHAN CCCCEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA