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The map label for this gene is yciK [C]

Identifier: 38233492

GI number: 38233492

Start: 867146

End: 867955

Strand: Reverse

Name: yciK [C]

Synonym: DIP0896

Alternate gene names: 38233492

Gene position: 867955-867146 (Counterclockwise)

Preceding gene: 38233493

Following gene: 38233491

Centisome position: 34.88

GC content: 56.17

Gene sequence:

>810_bases
ATGATGAGTGAACGCACCTTTGTTGTTACTGGCGCTTCGGATGGAATTGGTGCTGCTGCGATACGGCGGCTGCGTCGTCA
ATTTCCTAGTGATCGTGTGGTTATCGTTGGCCGGAATCTGGTAAAGACGCAGGCTGTTGCACGTGAGTGCGGGGTGCGTT
TTCATGTGGCGGATTTTGAGGATTTGAGTCAGGTGCGCCGGTTGGCTGCAGAGCTTGGTGACCTGTCGCGCATTGATGGT
CTGGCGAATAATGCGGGCGGGCTTTTCGACGGCCCCGTCATCACTCGTGACGGGTGGGAGCGGACATGGCAGGTCAATGT
GGTGGCACCGTTTTTGTTGACGTCGTTATTGCGCCCACAGCTGGCGGCTGCAACGGTGGTTCAGACGGCGTCGATAGCTA
ATGCGTTGATGTCGTGGTTTCGTCCGGACGATCCTGATTCCTCACGGGGGTTTTCGTCTGAGAGGGCCTACGGCAATGCA
AAACTGGGCGATATTTTGATGACTCGTTATTTCCACGCGCATGGACTGCGATCGGTGGCATTCCACCCTGGTGTTCTGGC
TACGGGTTTTGCGCAGGGAACGTCGGGGGTATTGGGGCGGTTGTATTCGGGCGCGATCGGAAAGCGGTTTGATTCTCCTG
ATGCTGGTGGCCGATTGTTGGTTCGTTTCCTCACGGAGGAGGTGGAGTCGGGGATGTATTACAACAACAAACTTTCGGCG
GGCTGGCAGCGTCCGATTGCGCGAAATCCCAAGGTTGCTTCTCGTGTTTTCGATGATCTGAGTTCGCAGCTTGGGGTGAG
CTGGGGCTAA

Upstream 100 bases:

>100_bases
GCGGATGCGATTCGTCTTGTGATTGAGCGTGGTGTGAGTGTGGCTCAGAATGAGATTCATCGTCGTTGATTAAGAGGCGG
ATGGGGTTAGAATCGCTTCC

Downstream 100 bases:

>100_bases
GATATTTCCTCATGAGTTCTGTTGCGCAAGAAGCCCATCGCCGTCGTACATTTGCTGTTATTGCTCACCCTGATGCTGGT
AAGTCAACGCTGACGGAGGC

Product: putative oxydoreductase

Products: NA

Alternate protein names: Short-Chain Dehydrogenase; Oxidoreductase; Retinol Dehydrogenase; Short Chain Dehydrogenase; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase/Reductase Sdr; Dehydrogenase/Reductase; Oxydoreductase; Daunorubicin C-13 Ketoreductase; Dehydrogenase; NAD Dependent Epimerase/Dehydratase Family Protein; Short-Chain Dehydrogenase/Reductase Family Protein; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQAVARECGVRFHVADFEDLSQVRRLAAELGDLSRIDG
LANNAGGLFDGPVITRDGWERTWQVNVVAPFLLTSLLRPQLAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNA
KLGDILMTRYFHAHGLRSVAFHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVRFLTEEVESGMYYNNKLSA
GWQRPIARNPKVASRVFDDLSSQLGVSWG

Sequences:

>Translated_269_residues
MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQAVARECGVRFHVADFEDLSQVRRLAAELGDLSRIDG
LANNAGGLFDGPVITRDGWERTWQVNVVAPFLLTSLLRPQLAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNA
KLGDILMTRYFHAHGLRSVAFHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVRFLTEEVESGMYYNNKLSA
GWQRPIARNPKVASRVFDDLSSQLGVSWG
>Mature_269_residues
MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQAVARECGVRFHVADFEDLSQVRRLAAELGDLSRIDG
LANNAGGLFDGPVITRDGWERTWQVNVVAPFLLTSLLRPQLAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNA
KLGDILMTRYFHAHGLRSVAFHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVRFLTEEVESGMYYNNKLSA
GWQRPIARNPKVASRVFDDLSSQLGVSWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI186928839, Length=283, Percent_Identity=30.0353356890459, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI225579078, Length=287, Percent_Identity=28.2229965156794, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17558006, Length=207, Percent_Identity=31.4009661835749, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29274; Mature: 29274

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQAVARECGVRFHVADFE
CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCEEEECCHH
DLSQVRRLAAELGDLSRIDGLANNAGGLFDGPVITRDGWERTWQVNVVAPFLLTSLLRPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHH
LAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNAKLGDILMTRYFHAHGLRSVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCHHHH
FHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVRFLTEEVESGMYYNNKLSA
CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCC
GWQRPIARNPKVASRVFDDLSSQLGVSWG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQAVARECGVRFHVADFE
CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCEEEECCHH
DLSQVRRLAAELGDLSRIDGLANNAGGLFDGPVITRDGWERTWQVNVVAPFLLTSLLRPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEHHHHHHHHHHHHH
LAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNAKLGDILMTRYFHAHGLRSVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCHHHH
FHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVRFLTEEVESGMYYNNKLSA
CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCC
GWQRPIARNPKVASRVFDDLSSQLGVSWG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA