| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ykvI [H]
Identifier: 38233467
GI number: 38233467
Start: 843569
End: 845032
Strand: Direct
Name: ykvI [H]
Synonym: DIP0870
Alternate gene names: 38233467
Gene position: 843569-845032 (Clockwise)
Preceding gene: 38233466
Following gene: 38233468
Centisome position: 33.9
GC content: 53.07
Gene sequence:
>1464_bases ATGCTCAAAAAAACAATTACTATCGCGATGGCGTTCGTCGGAATTGTTATCGGCGCCGGCTTCGCCACCGGCCAAGAGGT ACTCCAGTACTTCGTGTCCTTCGGAATGATGGGCATTTTTGGCGCGGCGCTATCGGCAGTGATTATGACCGTTACCGGTA TGGCATCTATCCAGCTGGGGTCGTACTTCCTAGCTAACGATCACGGCTCGGTGTTGCGTCGAATCTCGCACCCTATTGTG GCGCGTATTCTCGATGTCGCTGTTTTGATCACCCTATTTGCTACGGGCGTGGTTATGCTCGCAGGTTCTGGTTCCAACCT GAATCAGCAGTTCGGTTGGCCGGCGTGGGCGGGCTCATTGCTCATGCTGGTGCTCGTGATGGTCGCGGGGCTTCTCGACG TAGACAAGCTCACTGCTGTTATCGGATCGATTACACCGCTTATCATTATCTTTGTCATCGTCGCGATTGTGTACGCTTTG AGCACCAGCAGCGCTGACATCGATACTCTTAACCAAGCTGCGGCAACGATTAACTCCGCAACCCCGCACTGGGCGCTAGC ATCTCTTAACTACGTTGGTTTGGCTCTTATGATGGGTGTCTCTATGGCGATCATCATCGGTGGCAACAATGTTGACCCTC GTGCCGCTGGCCTAGGCGGACTTACAGGTGGAGTGATCTACGGTGTGATGCTGACCTTCACCGCGTTAGCTCTTTACCGC GTTGCCGACAAGGTAGCTGCTGACGATGTGCCTATGCTGACCATCATTAACGAGATCCACCCAATTTTGGGCACCGTGAT GTCGCTCGTTATCGTGGGCATGATTTTTAACACGGCGTTGGGCATGTTCTACGCCTTTGCTAAGCGTGCTACTTCCTCAC GGAGGGCGCTGTTTTACCCTGTATATTTGATCGCTTCTGCGTTGGGCTTTGCGGCGTCATTCCTCGGCTTTAAAAAGCTG GTGGGCGTGGTTTACCCGGCACTGGGTTACCTCGGTATTTTGCTTGTTGTTGTGGTTGCTGTGGCATGGTTGCGTGGCTT TGCCAAGATTCGTGACGAGCGTGCTCGCCGCGACAAAATCCATAACCTCATCAAGCGTAAACTGGATCCTACGAAGCGTT TTAGCTCGAAACAGCAGCGTCAGCTTGATCGTTTGACGCGTGAATCTAACCTCAAGCCAAGTGAGCTGAAGGAAACGATC CGTGAGGAAGTCGTGGAAGAACTTGCAGGTGCTGCAGATGGTGATGATGTCGACGCAGTAATCGATGAGGCTGCCGGTAT CACCACAACCTACGAGCCGATCGAGTTTGAAGATACGACCGTCAGCGTGGAAGATACTTCGCTTGGTCTGCCATCGCATG CGCGTCCTATGTCGGAGCTCGAAGACCTCACTACTTTTGAAGAAGACATAGCTGAGGAGGCTGCGACTAACACGCCAGCT GATAAACCGGCGGCGAAGCACTAA
Upstream 100 bases:
>100_bases CCACCTACGGCACCGTCGATAAGCAGGCATCGTAAAGATGTCAGAGCACAATTAAACAAAAATTTCACACACGTATTTTG AAAGGTGAGCACCTTTAACC
Downstream 100 bases:
>100_bases AAACTTTTTCACACCGACGCCCCCATCTCCCGCGAGTGCCCGCTGAGGCAGTAGCAGGGAGGAGGGGGCGTCGTTTTGCT TATCTCTACAGTGTGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALSAVIMTVTGMASIQLGSYFLANDHGSVLRRISHPIV ARILDVAVLITLFATGVVMLAGSGSNLNQQFGWPAWAGSLLMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYAL STSSADIDTLNQAAATINSATPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLTGGVIYGVMLTFTALALYR VADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALGMFYAFAKRATSSRRALFYPVYLIASALGFAASFLGFKKL VGVVYPALGYLGILLVVVVAVAWLRGFAKIRDERARRDKIHNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKETI REEVVEELAGAADGDDVDAVIDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMSELEDLTTFEEDIAEEAATNTPA DKPAAKH
Sequences:
>Translated_487_residues MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALSAVIMTVTGMASIQLGSYFLANDHGSVLRRISHPIV ARILDVAVLITLFATGVVMLAGSGSNLNQQFGWPAWAGSLLMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYAL STSSADIDTLNQAAATINSATPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLTGGVIYGVMLTFTALALYR VADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALGMFYAFAKRATSSRRALFYPVYLIASALGFAASFLGFKKL VGVVYPALGYLGILLVVVVAVAWLRGFAKIRDERARRDKIHNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKETI REEVVEELAGAADGDDVDAVIDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMSELEDLTTFEEDIAEEAATNTPA DKPAAKH >Mature_487_residues MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALSAVIMTVTGMASIQLGSYFLANDHGSVLRRISHPIV ARILDVAVLITLFATGVVMLAGSGSNLNQQFGWPAWAGSLLMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYAL STSSADIDTLNQAAATINSATPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLTGGVIYGVMLTFTALALYR VADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALGMFYAFAKRATSSRRALFYPVYLIASALGFAASFLGFKKL VGVVYPALGYLGILLVVVVAVAWLRGFAKIRDERARRDKIHNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKETI REEVVEELAGAADGDDVDAVIDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMSELEDLTTFEEDIAEEAATNTPA DKPAAKH
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51961; Mature: 51961
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALSAVIMTVTGMASIQLG CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SYFLANDHGSVLRRISHPIVARILDVAVLITLFATGVVMLAGSGSNLNQQFGWPAWAGSL CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH LMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYALSTSSADIDTLNQAAATINSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC TPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLTGGVIYGVMLTFTALALYR CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH VADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALGMFYAFAKRATSSRRALFYP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VYLIASALGFAASFLGFKKLVGVVYPALGYLGILLVVVVAVAWLRGFAKIRDERARRDKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKETIREEVVEELAGAADGDDVDAV HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH IDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMSELEDLTTFEEDIAEEAATNTPA HHHHCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DKPAAKH CCCCCCC >Mature Secondary Structure MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALSAVIMTVTGMASIQLG CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SYFLANDHGSVLRRISHPIVARILDVAVLITLFATGVVMLAGSGSNLNQQFGWPAWAGSL CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH LMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYALSTSSADIDTLNQAAATINSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC TPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLTGGVIYGVMLTFTALALYR CCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH VADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALGMFYAFAKRATSSRRALFYP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VYLIASALGFAASFLGFKKLVGVVYPALGYLGILLVVVVAVAWLRGFAKIRDERARRDKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKETIREEVVEELAGAADGDDVDAV HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH IDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMSELEDLTTFEEDIAEEAATNTPA HHHHCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DKPAAKH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]