| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233462
Identifier: 38233462
GI number: 38233462
Start: 837252
End: 838388
Strand: Direct
Name: 38233462
Synonym: DIP0865
Alternate gene names: NA
Gene position: 837252-838388 (Clockwise)
Preceding gene: 38233461
Following gene: 38233463
Centisome position: 33.64
GC content: 57.08
Gene sequence:
>1137_bases GTGTCCGGAACCGTCGTGATCGTCCTGATCGTCTTGGTGTGGCTCTTCGTGCTCGCACCATGGCTGCTGCGTGGCCAAAA GCCGATCCGTAAAGCCGGTGAGGGATTCGATGATACCCGCGTGGTGTACGAAGGTGGCAGTGAGCAGCTGCAACCACGGC ACCACCCAAAGGTTGGCCCCCATGATGTACACACTGGATATGAGGCCGATTCGGCTGAACATGAGTTGGAATACGCCGAA GTAACTGAGGTTATCGAACAATCTGCCGAAGTCGAGGAAGAAGACACTCAAGGACCGCTGATCGATCAAGATCCAGCAAC CACGTTGGGTGATGTATTCGCACACGCAAAAGAAAAGATTGGGGCTAAACGCTCCCGTGGGGAAACTCCGAATGCGTCTG TGATGCCACAGGTTATTGAAGGTGAAATTGTTGCAGAGCTACCAGCGCCTGAGGTTGTAGCGGACGAAGACAGCGCTCAC GACGAAACAAGCCTTGATGCGGTTGACGATGGTGACGAGGTGGCACGTTACGACTTCGATGATGCTTACGTTGGCCCCGA TGATCTGATGTACCCCTCCGATAACGATGTGGTTACCTCTCTCGATCGCAGCGAGGCCACAGCGGAACCTGTGCTCGATG ATGACTCTGATCTCACCGATGAGGAGCGTGCGTTTGCAGAGCGACGTAGCCATCGCGGTAGCTGGGATCCAGAATCTGAG GCGCAGGCGGTTGTAAGCCGTCAGCAGCGTCGTCAGCGGACCGTCATGGGGCTCGGTGCCGCAGTGATCGTCTCGTTGGT TGCAGCCGTGGTTTTCGGCGGTTGGGCTTGGGCGGGCGCAGGTGGTTGCGCAGGATTGCTGGCATTGTACCTGTGGGCAT TGCGTCGCCAAGTTATTGCGGAGCAAGCGCTGCGCCGTCGTCGTATTCAGCAGTTGCGTCGTGCACGTTGGGGCGTGCGC AACTCGGCTGATGAGGAACTTGGTATCCCGAACCGGTTGCGTCGCCCAGGGGCAGTAGTGCTAGAGATCGACGATGAGTC TCCTGATTTTGAATATCTTGACGTTGTGGCTGATTCCCGACGCGACGGGCAAACACCACACTTTGACGGTGCTGATCATC ACCGCCGCGTGGGCTAA
Upstream 100 bases:
>100_bases CCTTAGAAAATTACAGTGTTTGACTCTTAGCTCACTAGACGAGTTAAGACTCAGTGCTTTACGCTCATCACAAGTACAAC AACCCGGAAAGGCCTACAAC
Downstream 100 bases:
>100_bases GGTGTTGTTGTTTACTTCAACTGACAAGGGGAAGCGGGATTCATGGATCAGCCCATAGTGCGTGATATTGCCCTGCTAGT TTTTCGTGCGGTGTTGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEGGSEQLQPRHHPKVGPHDVHTGYEADSAEHELEYAE VTEVIEQSAEVEEEDTQGPLIDQDPATTLGDVFAHAKEKIGAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAH DETSLDAVDDGDEVARYDFDDAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEERAFAERRSHRGSWDPESE AQAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAGGCAGLLALYLWALRRQVIAEQALRRRRIQQLRRARWGVR NSADEELGIPNRLRRPGAVVLEIDDESPDFEYLDVVADSRRDGQTPHFDGADHHRRVG
Sequences:
>Translated_378_residues MSGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEGGSEQLQPRHHPKVGPHDVHTGYEADSAEHELEYAE VTEVIEQSAEVEEEDTQGPLIDQDPATTLGDVFAHAKEKIGAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAH DETSLDAVDDGDEVARYDFDDAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEERAFAERRSHRGSWDPESE AQAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAGGCAGLLALYLWALRRQVIAEQALRRRRIQQLRRARWGVR NSADEELGIPNRLRRPGAVVLEIDDESPDFEYLDVVADSRRDGQTPHFDGADHHRRVG >Mature_377_residues SGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEGGSEQLQPRHHPKVGPHDVHTGYEADSAEHELEYAEV TEVIEQSAEVEEEDTQGPLIDQDPATTLGDVFAHAKEKIGAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAHD ETSLDAVDDGDEVARYDFDDAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEERAFAERRSHRGSWDPESEA QAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAGGCAGLLALYLWALRRQVIAEQALRRRRIQQLRRARWGVRN SADEELGIPNRLRRPGAVVLEIDDESPDFEYLDVVADSRRDGQTPHFDGADHHRRVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41738; Mature: 41607
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEGGSEQLQPRHHPKVGP CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC HDVHTGYEADSAEHELEYAEVTEVIEQSAEVEEEDTQGPLIDQDPATTLGDVFAHAKEKI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAHDETSLDAVDDGDEVARYDFD CCHHCCCCCCCCCCCHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCC DAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEERAFAERRSHRGSWDPESE CCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH AQAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAGGCAGLLALYLWALRRQVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHH EQALRRRRIQQLRRARWGVRNSADEELGIPNRLRRPGAVVLEIDDESPDFEYLDVVADSR HHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHCCC RDGQTPHFDGADHHRRVG CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEGGSEQLQPRHHPKVGP CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC HDVHTGYEADSAEHELEYAEVTEVIEQSAEVEEEDTQGPLIDQDPATTLGDVFAHAKEKI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAHDETSLDAVDDGDEVARYDFD CCHHCCCCCCCCCCCHHHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCC DAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEERAFAERRSHRGSWDPESE CCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH AQAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAGGCAGLLALYLWALRRQVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHH EQALRRRRIQQLRRARWGVRNSADEELGIPNRLRRPGAVVLEIDDESPDFEYLDVVADSR HHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHCCC RDGQTPHFDGADHHRRVG CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA