| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38233405
Identifier: 38233405
GI number: 38233405
Start: 786230
End: 786958
Strand: Direct
Name: 38233405
Synonym: DIP0806
Alternate gene names: NA
Gene position: 786230-786958 (Clockwise)
Preceding gene: 38233400
Following gene: 38233406
Centisome position: 31.59
GC content: 42.25
Gene sequence:
>729_bases ATGGATGGGTTCCAACTTGGAAATAATTCGCCGAAAGAGATCACGGTTTTTTGTGATGAATCGAGGCCCGAGGCGCTTAG GGCGGCTTCGATTACTCAGCGCTATCTTTGTATCGGCTCTATTTGGGTGGATAGGGAACGGGTACGCGAGGTAAATGAAG AAATTCGAGCCTTGCAGATTAAGTATTCAAAAATGGGTGAAGTGAAGTGGGGAAAGGTTTCACCATCTTCAATTCAATTC AATTGCGAGCTTATAGACCTCTTTTTTGATGAAAGATTCAACTTGCAGTTCAGGGCTATCGTGGTCGATAACCAAAAGGT TGATTTGTCCTATCATAACAACGATCAGGAACTTGGTTTCTACAAATTCTATTATCAGATGCTGAAACACAAACTGATTA ACGGCTGTAGCTACCGCATTTATTGTGACCTCAAAACTAACAAGATGAGAGGCAGAGCATCGACACTTGAGCATTATTTA CAGACTTATTGCCTTGGCAGTGTTGAGATGGTTCAACTTCTTCCGTCGAATGACTTGCCACTAATGCAGCTTACTGACCT GCTATTAGGGGCTGTATCGACAAAATTTAATTTCAGAATTCCAAAGTCGCCCGCAAAGAACGAAGTTATTTCAACAATTG AGCGGCACATTGGGCACCAGATACAGCCTACAAGGAAGAATGAGCAAAAGTTTAATGTTTTTTGTATCGAACCCGGGATG GGAAGATGA
Upstream 100 bases:
>100_bases GAGGCTATCGCACTGACCCGAAATTTTCAAGACGAATCGCCGTTACGGTTTTGTAAAGGTCAATCACTTTCCACGCATTG ATGCTGCTAAGGTAGGTTTT
Downstream 100 bases:
>100_bases CTGACAAGTACACTTTTCTCATTCTTCAAAATGAGCAAGAGTATAAGAACTACTTTGTGCACAACTATTGTCAGGGACCG TTGGTCACTGTTCACGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDRERVREVNEEIRALQIKYSKMGEVKWGKVSPSSIQF NCELIDLFFDERFNLQFRAIVVDNQKVDLSYHNNDQELGFYKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYL QTYCLGSVEMVQLLPSNDLPLMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQPTRKNEQKFNVFCIEPGM GR
Sequences:
>Translated_242_residues MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDRERVREVNEEIRALQIKYSKMGEVKWGKVSPSSIQF NCELIDLFFDERFNLQFRAIVVDNQKVDLSYHNNDQELGFYKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYL QTYCLGSVEMVQLLPSNDLPLMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQPTRKNEQKFNVFCIEPGM GR >Mature_242_residues MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDRERVREVNEEIRALQIKYSKMGEVKWGKVSPSSIQF NCELIDLFFDERFNLQFRAIVVDNQKVDLSYHNNDQELGFYKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYL QTYCLGSVEMVQLLPSNDLPLMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQPTRKNEQKFNVFCIEPGM GR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28180; Mature: 28180
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDRERVREVNEEIRALQI CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEHEEECHHHHHHHHHHHHEEEE KYSKMGEVKWGKVSPSSIQFNCELIDLFFDERFNLQFRAIVVDNQKVDLSYHNNDQELGF EHHHCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCHH YKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYLQTYCLGSVEMVQLLPSNDLP HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC LMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQPTRKNEQKFNVFCIEPGM HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC GR CC >Mature Secondary Structure MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDRERVREVNEEIRALQI CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEHEEECHHHHHHHHHHHHEEEE KYSKMGEVKWGKVSPSSIQFNCELIDLFFDERFNLQFRAIVVDNQKVDLSYHNNDQELGF EHHHCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCEEEEEECCCCCCCHH YKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYLQTYCLGSVEMVQLLPSNDLP HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC LMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQPTRKNEQKFNVFCIEPGM HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA