| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233403
Identifier: 38233403
GI number: 38233403
Start: 781172
End: 783724
Strand: Reverse
Name: 38233403
Synonym: DIP0804
Alternate gene names: NA
Gene position: 783724-781172 (Counterclockwise)
Preceding gene: 38233404
Following gene: 38233402
Centisome position: 31.49
GC content: 62.67
Gene sequence:
>2553_bases ATGGCTGTTCCAGGTTTCACCTTTGACGAGGCCCTGCTCACCGAAATCGCGGCCAGCTTCCAGCTCCGTGCCTCCAACAT CAACGCGCTCACCGCACTCGTGCAGCGTCTGTCCGGTGACTTCGACCGCTCCACCCCGCAGGTGATGAACATGGCCACCG GCGCGGGCAAGACCTACGTCATGGCGGCGTTTATCGAATACATGCGCCGCCAGGGTCTGCGCAACGTCATGATCGTCACC CCAGGTCTGGTGGTGCAGACCAAGACGGTCGCCAACTTCACACAGGGCTCACCTAAGTTCATTGACGGCTCCCCCGTCCC GCCGCGTGTGGTCACGCCGGAAAATTACAAGTCCAATCCGGCGGACCAGACCGCGTTCACCGAGCAGGGCGCGTCCAACG TGTACGTGTTCAACGTGCAACAGCTCATTGGACCGAAAGACATGGACGGTGACACCACCTCCGGTTCCAAGGCTGCGGTT GCACGCGGCGTCCACAAGTTCTCCGAGTACGCGGGCGTGTTGTACGACGAGCTGAAAAACATGGATGACCTCGTTGTTCT GGCGGACGAGCACCACCTTTACTCGGCCAAGGCCAAGGCGTTCCACGCCGCCATCCACGATCTTGAGCCCGCAGCACTGG TGGGTCTTACCGCGTCACCCGGTGAGAAGGACGAGACCATCTTCACCTACCCGCTGTACAAGGCCATCGCGGACAAAAAC GTCAAACAGCCCGTGATCGTCTACCGCAAGGACGGCTACGGCGAGCTGGGCGAATACCAGCAGCTCAAGGACGCAAAGAC CCTTCTGGAGACCAAGGCAGGCCACTACGCGGTCAAGAACCAGGAGGAGGGTACGTCCCCCATCTCGCCGGTCATGCTCG TGGTGTGTGAGGACATCGCCCACGCCACCCGTATCGAGGAAACCCTCGTTGGCCCGGACCTGTTCGGTGACCCGTACGCC GTACTACGCGTGGACTCGGACTCTATGAATGAGGAGAAGGCCGCACTCCTGGACGCTATCGACACCCCCGACTCCCCTGT CCGGGCTGTGGTGAGCGTGAACAAGCTCAAGGAGGGCTGGGACTGCCGCTCCATCGCGGTCATGGTAACGCTGCGTGCCA TGGACTCGGACATCTTGACCCAGCAGACCCTGGGGCGCGGCCTGCGTCTGCCGTACGGCAAGTACGCCGAGGTCGAGGCC ATCGACACCCTGGACATCGTGGCGCACGAGTCGTTCCAGCGCCTGCTTTCCAGCGAGAAGGTCAACAAGTCGTTCGGTTT CGATAAGCGCAAGACCAGTCAGCCGGCCCCACCGCAGCCGGTCCACCCAATGGACGTGACACCACCAACCCCAGTCCCGA CACCAGACCTTGACCCCGTACCGGGCGGCAACACCACTGCCCCAACGCCGGTACTCCCACCAGCTGACCCGCAGCCGGTG GCCCCAGACCTAGACAAGGGAACCGACACCAGGCCACCGCTCGGTCTCAAGGAATTGGGCGGCGACGGTGCGTCGCCGGA GGACCTGTACCCGGAGCCGACCCCGCTCGCGGTCGTAGAACTCGTGGAGAAGTTCAGGGACGTGTCATTCCTGTTCCCGC GCACCACCTACACGGCCAAGAACGCGGCCTATCCATTGGAAAAGCTCATGCAGGACGAGATCATCCAGGTCGCGCGGCAG ATCACGGACAACCCGCAGGCCGTGCTGGAACGTCTGGCACTGGCCGGTGACGAGGCACAGGGCCGGGTGATGGCGAAGCG ACTCACCCAGGGCACCATCGACGCTATTGCGCTGGACGAGGACGCAGTGAAGAAGCAGCTTGTGGGTGCGATCATTACCC ACCGCCGTGTGGAGCGCTCGCCTGAAAATATCAGCCAGGCCAAAAACCGTATCGCGCCACTGATCTACAACAATGCGCTC GCTACGACGTGGACGGTCGATACCCTGCACGTCGCGTCCATACTGCTCGGTAAAGCAATTGACGCGTCCGTGCGCCAGTT CCTCGCCAATCTGGAGCCGGATGTCACACTCGTGCCGCTGACTATGCCGACCCGCACGCGGTTCGAGCTCGGGGTCGGCA AGACCATCGAGCCACGCCCGGGCGAGTTCGACAAGTACATCAACGGCCAGTTCTACAGCGGTTGGACGCGCAACCTGTAC ACCGCAGCGTCCTTCGACTCCAACTCTGCGGAGCACAAACTGGCCTGCGACCTGGACGTCTCCCCAGACGTGGAGTGGTG GACGCGCCTGTACATGGCCGACGGCGCGTCCATTGACTACCAGGTGGGCAAGACCTACTACCCCGACTTCGTGGTCCGCG ACCGCGAGGGACGTACCTGGATTGTCGAGGGCAAGGACGCGGGCGGCCGCACCAACGAAGAGGTCAAGGCCAAGCGCGAC GCCGCGGAACTGGCACTCAACCTCATGGCCAGCAACGAGGACATGGGCGCGCTCAAGGTCGGGTACATCATCGCCTACGA GGACACGATCAAGGAAGCAGGGTCGTGGTCCCGGCTCATTTCCATGTCCGGGGCGGTGAAGTCAGCGAACTAG
Upstream 100 bases:
>100_bases CACCACCTACCTGCACAAGCGGGCCAAGGGCTCGCGCGCACTGTCCATCCCAGACGGGATGTTCACCCACACGCTGAGCA CGAAAGACGAGGCATAAGAC
Downstream 100 bases:
>100_bases GGACACGAAAAATGCAGGTAGAACGACAAAAGAGCAAGTCACACTACCCGGGAGAAAGCGCATGGCACACCTATCAGCGG GCAGTGAAGAAGGCGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Type III Restriction Res Subunit; Type III Restriction; DNA Restriction- System Restriction; Type III Restriction- Helicase Subunit; Type III Restriction Res Subunit Family; PstII Restriction- Res Subunit; Type III Restriction- System R Subunit
Number of amino acids: Translated: 850; Mature: 849
Protein sequence:
>850_residues MAVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRSTPQVMNMATGAGKTYVMAAFIEYMRRQGLRNVMIVT PGLVVQTKTVANFTQGSPKFIDGSPVPPRVVTPENYKSNPADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAV ARGVHKFSEYAGVLYDELKNMDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGEKDETIFTYPLYKAIADKN VKQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQEEGTSPISPVMLVVCEDIAHATRIEETLVGPDLFGDPYA VLRVDSDSMNEEKAALLDAIDTPDSPVRAVVSVNKLKEGWDCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVEA IDTLDIVAHESFQRLLSSEKVNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLDPVPGGNTTAPTPVLPPADPQPV APDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLAVVELVEKFRDVSFLFPRTTYTAKNAAYPLEKLMQDEIIQVARQ ITDNPQAVLERLALAGDEAQGRVMAKRLTQGTIDAIALDEDAVKKQLVGAIITHRRVERSPENISQAKNRIAPLIYNNAL ATTWTVDTLHVASILLGKAIDASVRQFLANLEPDVTLVPLTMPTRTRFELGVGKTIEPRPGEFDKYINGQFYSGWTRNLY TAASFDSNSAEHKLACDLDVSPDVEWWTRLYMADGASIDYQVGKTYYPDFVVRDREGRTWIVEGKDAGGRTNEEVKAKRD AAELALNLMASNEDMGALKVGYIIAYEDTIKEAGSWSRLISMSGAVKSAN
Sequences:
>Translated_850_residues MAVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRSTPQVMNMATGAGKTYVMAAFIEYMRRQGLRNVMIVT PGLVVQTKTVANFTQGSPKFIDGSPVPPRVVTPENYKSNPADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAV ARGVHKFSEYAGVLYDELKNMDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGEKDETIFTYPLYKAIADKN VKQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQEEGTSPISPVMLVVCEDIAHATRIEETLVGPDLFGDPYA VLRVDSDSMNEEKAALLDAIDTPDSPVRAVVSVNKLKEGWDCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVEA IDTLDIVAHESFQRLLSSEKVNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLDPVPGGNTTAPTPVLPPADPQPV APDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLAVVELVEKFRDVSFLFPRTTYTAKNAAYPLEKLMQDEIIQVARQ ITDNPQAVLERLALAGDEAQGRVMAKRLTQGTIDAIALDEDAVKKQLVGAIITHRRVERSPENISQAKNRIAPLIYNNAL ATTWTVDTLHVASILLGKAIDASVRQFLANLEPDVTLVPLTMPTRTRFELGVGKTIEPRPGEFDKYINGQFYSGWTRNLY TAASFDSNSAEHKLACDLDVSPDVEWWTRLYMADGASIDYQVGKTYYPDFVVRDREGRTWIVEGKDAGGRTNEEVKAKRD AAELALNLMASNEDMGALKVGYIIAYEDTIKEAGSWSRLISMSGAVKSAN >Mature_849_residues AVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRSTPQVMNMATGAGKTYVMAAFIEYMRRQGLRNVMIVTP GLVVQTKTVANFTQGSPKFIDGSPVPPRVVTPENYKSNPADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAVA RGVHKFSEYAGVLYDELKNMDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGEKDETIFTYPLYKAIADKNV KQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQEEGTSPISPVMLVVCEDIAHATRIEETLVGPDLFGDPYAV LRVDSDSMNEEKAALLDAIDTPDSPVRAVVSVNKLKEGWDCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVEAI DTLDIVAHESFQRLLSSEKVNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLDPVPGGNTTAPTPVLPPADPQPVA PDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLAVVELVEKFRDVSFLFPRTTYTAKNAAYPLEKLMQDEIIQVARQI TDNPQAVLERLALAGDEAQGRVMAKRLTQGTIDAIALDEDAVKKQLVGAIITHRRVERSPENISQAKNRIAPLIYNNALA TTWTVDTLHVASILLGKAIDASVRQFLANLEPDVTLVPLTMPTRTRFELGVGKTIEPRPGEFDKYINGQFYSGWTRNLYT AASFDSNSAEHKLACDLDVSPDVEWWTRLYMADGASIDYQVGKTYYPDFVVRDREGRTWIVEGKDAGGRTNEEVKAKRDA AELALNLMASNEDMGALKVGYIIAYEDTIKEAGSWSRLISMSGAVKSAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92908; Mature: 92777
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRSTPQVMNMATGAGKTYV CCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH MAAFIEYMRRQGLRNVMIVTPGLVVQTKTVANFTQGSPKFIDGSPVPPRVVTPENYKSNP HHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC ADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAVARGVHKFSEYAGVLYDELKN CCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC MDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGEKDETIFTYPLYKAIADKN CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCC VKQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQEEGTSPISPVMLVVCEDIA CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH HATRIEETLVGPDLFGDPYAVLRVDSDSMNEEKAALLDAIDTPDSPVRAVVSVNKLKEGW HHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVEAIDTLDIVAHESFQRLLSSEK CHHHEEEEEEHHHHCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH VNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLDPVPGGNTTAPTPVLPPADPQPV HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLAVVELVEKFRDVSFLFPRTTYTAK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCC NAAYPLEKLMQDEIIQVARQITDNPQAVLERLALAGDEAQGRVMAKRLTQGTIDAIALDE CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCH DAVKKQLVGAIITHRRVERSPENISQAKNRIAPLIYNNALATTWTVDTLHVASILLGKAI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHH DASVRQFLANLEPDVTLVPLTMPTRTRFELGVGKTIEPRPGEFDKYINGQFYSGWTRNLY HHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHCCCEEECCCCCCEE TAASFDSNSAEHKLACDLDVSPDVEWWTRLYMADGASIDYQVGKTYYPDFVVRDREGRTW EEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCEECCCEEEECCCCCEE IVEGKDAGGRTNEEVKAKRDAAELALNLMASNEDMGALKVGYIIAYEDTIKEAGSWSRLI EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCCHHHHH SMSGAVKSAN HHCCCCCCCC >Mature Secondary Structure AVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRSTPQVMNMATGAGKTYV CCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH MAAFIEYMRRQGLRNVMIVTPGLVVQTKTVANFTQGSPKFIDGSPVPPRVVTPENYKSNP HHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCC ADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAVARGVHKFSEYAGVLYDELKN CCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC MDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGEKDETIFTYPLYKAIADKN CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCC VKQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQEEGTSPISPVMLVVCEDIA CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH HATRIEETLVGPDLFGDPYAVLRVDSDSMNEEKAALLDAIDTPDSPVRAVVSVNKLKEGW HHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC DCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVEAIDTLDIVAHESFQRLLSSEK CHHHEEEEEEHHHHCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH VNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLDPVPGGNTTAPTPVLPPADPQPV HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLAVVELVEKFRDVSFLFPRTTYTAK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCC NAAYPLEKLMQDEIIQVARQITDNPQAVLERLALAGDEAQGRVMAKRLTQGTIDAIALDE CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCH DAVKKQLVGAIITHRRVERSPENISQAKNRIAPLIYNNALATTWTVDTLHVASILLGKAI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHHHHHH DASVRQFLANLEPDVTLVPLTMPTRTRFELGVGKTIEPRPGEFDKYINGQFYSGWTRNLY HHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHCCCEEECCCCCCEE TAASFDSNSAEHKLACDLDVSPDVEWWTRLYMADGASIDYQVGKTYYPDFVVRDREGRTW EEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCEECCCEEEECCCCCEE IVEGKDAGGRTNEEVKAKRDAAELALNLMASNEDMGALKVGYIIAYEDTIKEAGSWSRLI EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCCHHHHH SMSGAVKSAN HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA