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The map label for this gene is yjbQ [H]

Identifier: 38233393

GI number: 38233393

Start: 775062

End: 776261

Strand: Reverse

Name: yjbQ [H]

Synonym: DIP0794

Alternate gene names: 38233393

Gene position: 776261-775062 (Counterclockwise)

Preceding gene: 38233394

Following gene: 38233392

Centisome position: 31.19

GC content: 52.33

Gene sequence:

>1200_bases
ATGCTTCTTGATGCTGATCCGCTTGTGTCTTTTGCATGGATTATGGGTGCGGCCCTTCTTGCTCCGTTGTTGTCATACGC
CACTGGGAAACGTTTACCAGCGGTGGTGTTGCTTATTTGTTTTGGCCTAGTGATCGGCCCTAATGTGCTTGGCCTAGCTT
CCCTAGACGGTGGCGTTGGGCTGATTAAAGAGATCGGCCTGGGAATGCTGTTTTTGTTGGCTGGTTATGAGATTGAACCT
GAAACACTACGAGGTAAAGAGGGTCGCACGGGGTTGGCTACTTGGCTGATGTGTGCTGTGTTAAGTTTCCTTGGCGCGAT
GAGCATTGTGGGCTTTCATAGCTCCTCCACGGCGATTGTGTTGGCGATCGCGCTGACGTCGACAGCTATTGGCACCTTGC
TTCCTATTATGAAGCAGCACGATATGTTGGATACTCCTGTGGGAAGGTCGTTGTTGATCCACGGTGCTATCGGCGAGATT
GCCCCGATTCTTGCGATGGCGTTGTTGTTGTCTTCGCGTTCGACGTGGCTTACCACGGCTGTGTTGTTGGCGTTTTTCTT
GGTTGCCGCGGTTGTTGCGATTGTGCCGCGGACGGTGAAGTTCTTCTTGCCGTGGATGGGGCGTGCCATGGTTGATGGCG
CTGGTTCGACGAATCAGACGGTGCTGCGACTGGTGTTGCTTATGCTGGCGATTTTGATGTCCGTTGCCGCGGTGTTTGAG
CTGGATGTTGTGCTGGGTGCGTTTGCGGCTGGGTTTATTTTGCGCCAGATGGTTCCGGAAAAATATCGCACTCCTTTAGA
GCAGCGGCTCGATATTGTGGGATATAGCTTGTTTATTCCGGTGTTCTTTGTGTGTTCTGGCATGGCGATTAATCCGCAGG
CGGTTGCTGAGAAGCCGTGGTTGTTGGTGGCGTTGGTGCCGCTGTTTTATGTCACTCGTGGATTGCCGATTTTCCTTCGC
GAGGTGTTCTTTTCTACCGGTTCTGAGGTGTCTGGTTGGAAGGAAAGTTTGCAGTTATCGTTGTATGCGGCGACAGCGCT
TCCAATTATCGTGGCGGTGACTGAGGTGGCTACGCATTCGAAGCTGTTGAGTGCGGATAATGCTTCTATTTTGGTTGCGG
CTGGTTCTGTGACGGTGTTGCTGTTTCCGCTTATTGGCAATTTGATTACGCAGGGGCGTCGTAATGCTGCGAGGGGTTAG

Upstream 100 bases:

>100_bases
CCCGCGACTCAAAAAGTTTTGGCACGAACTACTCACGGTGACGTGTCAACACGTTTTTCCATAGCAAGAAAACCTCAGAG
CACCAGTATTATTCTTCCTC

Downstream 100 bases:

>100_bases
ATTGCGCAGAATGTGGTCTCGATTTTCCACTTCACTACTGTTACTATTGTGACTTGAAATATCTTCCGAGGCTTATATTG
ACTCATGAGTCACGTGAGCC

Product: Na(+)/H(+) antiporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVIGPNVLGLASLDGGVGLIKEIGLGMLFLLAGYEIEP
ETLRGKEGRTGLATWLMCAVLSFLGAMSIVGFHSSSTAIVLAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEI
APILAMALLLSSRSTWLTTAVLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVLRLVLLMLAILMSVAAVFE
LDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPVFFVCSGMAINPQAVAEKPWLLVALVPLFYVTRGLPIFLR
EVFFSTGSEVSGWKESLQLSLYAATALPIIVAVTEVATHSKLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG

Sequences:

>Translated_399_residues
MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVIGPNVLGLASLDGGVGLIKEIGLGMLFLLAGYEIEP
ETLRGKEGRTGLATWLMCAVLSFLGAMSIVGFHSSSTAIVLAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEI
APILAMALLLSSRSTWLTTAVLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVLRLVLLMLAILMSVAAVFE
LDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPVFFVCSGMAINPQAVAEKPWLLVALVPLFYVTRGLPIFLR
EVFFSTGSEVSGWKESLQLSLYAATALPIIVAVTEVATHSKLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG
>Mature_399_residues
MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVIGPNVLGLASLDGGVGLIKEIGLGMLFLLAGYEIEP
ETLRGKEGRTGLATWLMCAVLSFLGAMSIVGFHSSSTAIVLAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEI
APILAMALLLSSRSTWLTTAVLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVLRLVLLMLAILMSVAAVFE
LDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPVFFVCSGMAINPQAVAEKPWLLVALVPLFYVTRGLPIFLR
EVFFSTGSEVSGWKESLQLSLYAATALPIIVAVTEVATHSKLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG

Specific function: Probable Na(+)/H(+) antiporter [H]

COG id: COG0475

COG function: function code P; Kef-type K+ transport systems, membrane components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 42346; Mature: 42346

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVIGPNVLGLASLDGGVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHH
LIKEIGLGMLFLLAGYEIEPETLRGKEGRTGLATWLMCAVLSFLGAMSIVGFHSSSTAIV
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEIAPILAMALLLSSRSTWLTTA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHH
VLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVLRLVLLMLAILMSVAAVFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPVFFVCSGMAINPQAVAEKPW
HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCH
LLVALVPLFYVTRGLPIFLREVFFSTGSEVSGWKESLQLSLYAATALPIIVAVTEVATHS
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG
HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVIGPNVLGLASLDGGVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCHH
LIKEIGLGMLFLLAGYEIEPETLRGKEGRTGLATWLMCAVLSFLGAMSIVGFHSSSTAIV
HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEIAPILAMALLLSSRSTWLTTA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHH
VLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVLRLVLLMLAILMSVAAVFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPVFFVCSGMAINPQAVAEKPW
HHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCH
LLVALVPLFYVTRGLPIFLREVFFSTGSEVSGWKESLQLSLYAATALPIIVAVTEVATHS
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG
HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]