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The map label for this gene is IS1086 [H]

Identifier: 38233368

GI number: 38233368

Start: 740277

End: 741590

Strand: Reverse

Name: IS1086 [H]

Synonym: DIP0764

Alternate gene names: 38233368

Gene position: 741590-740277 (Counterclockwise)

Preceding gene: 38233369

Following gene: 38233367

Centisome position: 29.8

GC content: 59.28

Gene sequence:

>1314_bases
GTGCAACGCCAGTTCTGGGGTCTGATCGCGACGGGAATCACCACTGCGCAGGCCGCCCTTCAGGTGGGGGTGTCCGTACC
GGTGGGAACGAGGTGGTTCCGTCATGCTGGTGGAATGAGACCGTTAGCTTTGGACGAGCCCTCGGGGCGGTATCTATCGT
TTGCTGAACGAGAGGAAATCGCGATCCTGTGGGAGAAACAGACGGGTGTGCGTGAGATCGCTCGACGGATTGGCCGCAAT
CCGGCGACGATTTCTCGTGAGCTACGGCGTAATGCTGCCACCCGTGGTGGCAAGCAGATTTATCGGGTAGGGGTGGCCCA
GTGGAAAGCTCAGGAAGCCGCTAAGCGTCCCAAACAAGCAAAACTCGTGGATAATCCGCGCCTGCGGGACTATGTTCAGG
AGCGTCTTGCTGGGACGGTCCGAGATGAAAACGGGGTCGTCATGGCGGGGCCTGATACGCCTGCGTGGAAGGGCCGGAGC
AAACCTCACAGGGCAGACCGACGGTGGTTGACCGCGTGGAGCCCGGAGCAGATATCGCAGCGGTTAAGGATCGACTTCCC
TGATGATGAGAGTATGAGAATCTCCCATGAAGCGATCTACCAGGCGCTCTATATTGAGGGGCGCGGGGCGCTGAAGCGTG
AACTCGTGGCCGCACTGCGGACTGGGCGGGCCCTGCGTAAACCCCGCGCCCGGTCCAAGAGCAAGCCTAAAGGTCATGTC
ACCGCCGATGTTGTCATCTCTAACCGGCCCCCGGAAGCCTCGGATCGGGCGGTGCCCGGGCATTGGGAAGGAGACTTGAT
CATCGGTACCGGCAGGTCAGCGATCGGGACCGTGGTCGAACGCTACAGCCGGTCGATCCTGCTGGTGCACCTGCCCCGGT
TGGACGGCTGGGGTGAACAACCAAGGACGAAGAACGGACCTGCCTTGGGTGGGTACGGTGCTGAAGCGATGAACACCGCC
CTACAAACCGTGATGAAAGATCTACCGTTACAACTGCGTCAAACGTTGACCTGGGACCGCGGAACCGAGCTCGCTGACCA
TGCCGCTTTCACTCTAGCCACGGGCACGAAAGTGTTCTTCGCGGACCCACACTCGCCATGGCAACGTCCCACGAATGAGA
ACAGCAACGGACTCCTACGCCAGTACTTTCCCAAGGGTACCGACCTGTCTCGATGGACAGCCCAAGACCTCGCCGCCATC
GCCTACACGCTCAACAACAGACCAAGAAAAGTCCTTGGATTTCGAACCCCAGCCGAAGTCTTCAATGAACAACTACAATC
AATTCAAAACAACAGTGTTGCAACCACCGATTGA

Upstream 100 bases:

>100_bases
GACCAGTGATATGCCGGTGGGGGTGCGGCGTCAGTGGCGTGCGGATCGGGCGTTGCGGCCTGCGATGCGTTCCCCGGGTA
GGCCGGTTCCGTCACGGGCG

Downstream 100 bases:

>100_bases
ATCCAAGGTGTACACATCAGCAGCGTTTAGCACACGATGCTAGGAACTTGGCGTAATCCAGTCCATGGGTGCTATCGGTA
ACAGTGCAGATAATGCGTTG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALDEPSGRYLSFAEREEIAILWEKQTGVREIARRIGRN
PATISRELRRNAATRGGKQIYRVGVAQWKAQEAAKRPKQAKLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRS
KPHRADRRWLTAWSPEQISQRLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHV
TADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVERYSRSILLVHLPRLDGWGEQPRTKNGPALGGYGAEAMNTA
LQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKVFFADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAI
AYTLNNRPRKVLGFRTPAEVFNEQLQSIQNNSVATTD

Sequences:

>Translated_437_residues
MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALDEPSGRYLSFAEREEIAILWEKQTGVREIARRIGRN
PATISRELRRNAATRGGKQIYRVGVAQWKAQEAAKRPKQAKLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRS
KPHRADRRWLTAWSPEQISQRLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHV
TADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVERYSRSILLVHLPRLDGWGEQPRTKNGPALGGYGAEAMNTA
LQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKVFFADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAI
AYTLNNRPRKVLGFRTPAEVFNEQLQSIQNNSVATTD
>Mature_437_residues
MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALDEPSGRYLSFAEREEIAILWEKQTGVREIARRIGRN
PATISRELRRNAATRGGKQIYRVGVAQWKAQEAAKRPKQAKLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRS
KPHRADRRWLTAWSPEQISQRLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHV
TADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVERYSRSILLVHLPRLDGWGEQPRTKNGPALGGYGAEAMNTA
LQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKVFFADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAI
AYTLNNRPRKVLGFRTPAEVFNEQLQSIQNNSVATTD

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=393, Percent_Identity=38.1679389312977, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1790736, Length=393, Percent_Identity=37.9134860050891, Blast_Score=238, Evalue=8e-64,
Organism=Escherichia coli, GI1787671, Length=393, Percent_Identity=37.9134860050891, Blast_Score=238, Evalue=8e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 48878; Mature: 48878

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALDEPSGRYLSFAEREEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEECCCCCE
AILWEKQTGVREIARRIGRNPATISRELRRNAATRGGKQIYRVGVAQWKAQEAAKRPKQA
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
KLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRSKPHRADRRWLTAWSPEQISQ
CCCCCCHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHH
RLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHV
HEECCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCE
TADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVERYSRSILLVHLPRLDGWGEQ
EEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
PRTKNGPALGGYGAEAMNTALQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKVFF
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHEEEEECCCEEEE
ADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAIAYTLNNRPRKVLGFRTPAEV
ECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHH
FNEQLQSIQNNSVATTD
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALDEPSGRYLSFAEREEI
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCEEEECCCCCE
AILWEKQTGVREIARRIGRNPATISRELRRNAATRGGKQIYRVGVAQWKAQEAAKRPKQA
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
KLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRSKPHRADRRWLTAWSPEQISQ
CCCCCCHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHH
RLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTGRALRKPRARSKSKPKGHV
HEECCCCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCE
TADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVERYSRSILLVHLPRLDGWGEQ
EEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
PRTKNGPALGGYGAEAMNTALQTVMKDLPLQLRQTLTWDRGTELADHAAFTLATGTKVFF
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHEEEEECCCEEEE
ADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAAIAYTLNNRPRKVLGFRTPAEV
ECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHH
FNEQLQSIQNNSVATTD
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]