| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is abgT [H]
Identifier: 38233353
GI number: 38233353
Start: 723044
End: 724642
Strand: Reverse
Name: abgT [H]
Synonym: DIP0747
Alternate gene names: 38233353
Gene position: 724642-723044 (Counterclockwise)
Preceding gene: 38233363
Following gene: 38233351
Centisome position: 29.12
GC content: 52.22
Gene sequence:
>1599_bases ATGAGCACGACCACACCGCCCCACAAGACTGCCCCTTCTGGCTTTCTCGGAAAAATAGAACAGCTAGGCAATCGATTACC AGACCCCTTCTGGATATTCGCCTTCCTCGCCATCATTGTGGCCATCAGCAGCTGGATAGGATCCGCCATCGGCATGACTG CTGTTAATCCTCAAGACGGATCGACAGTAGAAGTGACAAACCTGCTAACAAAAGAGGGCGCCACCAAAATGGTGAGCGAA GCGGTGAACAACTTTGTAGCCTTCCCACCGTTAGGCGTCATCATTACCGTCATGCTGGGTGTTTCCGTGGCCGAACACTC TGGCTTTATCAGCGCACTAGTACGCGCCATGGTAGCCAAAGTCGGTCCGAAGACCCTGACATACGTTGTCGCACTGGCAG GTGTGACCGGCTCAATTGCTTCAGACGCTGTCTACGTGATCCTCATTCCGCTTGGCGCCATGAGCTTCCGTGCCCTCGGC CGTTCCCCCATAGTGGGCGCCATGGTTGCCTTCGCCGCGTCGTCAGCGGGGTTTAATGCCAGCTTGATCCTTAACATCAC AGATGTTCTCCTTAGCGGAATTTCTACCTCCGCAGCGCAACTGGTCGATCCGGAATATCACGTTTCACCCCTTGCCAACT ACTTCTTCGTTGTCGCTTCTTCCCTCGTCCTTGCCTTGATTATCACCGCCGTGACAGAACTGTTCGTTAAAAACAGGGCA CGCCAGCTCGTCGATCACGACCACATCGATCACTCGGAATTAAGCTTTCGCGACGACGATCACCCCGACCTCGGCGCGAA AACCGATGAGGAACTAGCCGAGGAAATAGCACTCCATTCAGGGGAAATCCGCGCACTAACAATTGCAGGTGTGGCCTTTA TTGGTATGTTGGCCGTATATTTTGCACTCCTGTTTGTGCCGGCCTCGCCGTTTTATTCTGAAGAATCAGCGATGTCCAGT CCGCTCGTCAAGGCTGTTACTGTTCCGATTTCCTTGATGTTTTTAGGCCTTGGTGTGGTTTATGGGATCACGATAAAAAG CATCACGTCTCTAGGCGACATTCCGGCTTTTATGGCCAAGGGCTTGACCACTTTAATCCCAATGGTCGTGTTGTTCTTTA TGGTTGCCCAATTCCTCGCATGGTTCCAATGGTCAAATCTTGGCATTTGGACTGCGATCAAGGGCGCGGAGCTGTTACAG CGTTGGGATCTGCCGGTCTATGTTTTGTTTGCTGCTGTAGTGCTCGCTGTGGCTCTTCTTAATCTCACGATTACATCGGG CTCTGCACAATGGGCATTAATGGCACCTGTGATTGTGCCGATGATGATGTATGTGGGCATTTCCCCTGAAGTCACGCAGA TGTTGTTCAGGATTGGCGACTCCCCGACTAACATCATCACTCCGATGAGCCCTTATTTCGCGCTCGCGCTGACATTCTTG CAGTGTTACTACAAACCAGCTGGTGTGGGCACACTGGTGTCGCTTGCATTGCCGTATTCCATTGCGATGCTTGTTGGCTG GTTTGCCTTCTTTATTGTTTGGTACGCACTAGGGATTCCGCTGGGTCTTGGAACCCCTATGCACTTCCAGCAGGGTTAG
Upstream 100 bases:
>100_bases ACACGGCGCAGCACCCCCACACAGCAAACCCTATGACCACCATCACATCATCGTCAGTACACTGGCGGACATCATTGTTG CCGACGATCGGAGCCCAGAA
Downstream 100 bases:
>100_bases TTTTGCCCCTGTTGTTCCGCCATGCGCCAGCGAATACCTGCTTCTAGGAGGCCATCGATGTCGCCGTCGAGAACCTTCTG GGGGTCATTGACCTCATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MSTTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSWIGSAIGMTAVNPQDGSTVEVTNLLTKEGATKMVSE AVNNFVAFPPLGVIITVMLGVSVAEHSGFISALVRAMVAKVGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALG RSPIVGAMVAFAASSAGFNASLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSLVLALIITAVTELFVKNRA RQLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSGEIRALTIAGVAFIGMLAVYFALLFVPASPFYSEESAMSS PLVKAVTVPISLMFLGLGVVYGITIKSITSLGDIPAFMAKGLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELLQ RWDLPVYVLFAAVVLAVALLNLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRIGDSPTNIITPMSPYFALALTFL QCYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYALGIPLGLGTPMHFQQG
Sequences:
>Translated_532_residues MSTTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSWIGSAIGMTAVNPQDGSTVEVTNLLTKEGATKMVSE AVNNFVAFPPLGVIITVMLGVSVAEHSGFISALVRAMVAKVGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALG RSPIVGAMVAFAASSAGFNASLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSLVLALIITAVTELFVKNRA RQLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSGEIRALTIAGVAFIGMLAVYFALLFVPASPFYSEESAMSS PLVKAVTVPISLMFLGLGVVYGITIKSITSLGDIPAFMAKGLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELLQ RWDLPVYVLFAAVVLAVALLNLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRIGDSPTNIITPMSPYFALALTFL QCYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYALGIPLGLGTPMHFQQG >Mature_531_residues STTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSWIGSAIGMTAVNPQDGSTVEVTNLLTKEGATKMVSEA VNNFVAFPPLGVIITVMLGVSVAEHSGFISALVRAMVAKVGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALGR SPIVGAMVAFAASSAGFNASLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSLVLALIITAVTELFVKNRAR QLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSGEIRALTIAGVAFIGMLAVYFALLFVPASPFYSEESAMSSP LVKAVTVPISLMFLGLGVVYGITIKSITSLGDIPAFMAKGLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELLQR WDLPVYVLFAAVVLAVALLNLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRIGDSPTNIITPMSPYFALALTFLQ CYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYALGIPLGLGTPMHFQQG
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=511, Percent_Identity=35.2250489236791, Blast_Score=297, Evalue=1e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 56782; Mature: 56650
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSWIGSAIGMTAVNPQDG CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STVEVTNLLTKEGATKMVSEAVNNFVAFPPLGVIITVMLGVSVAEHSGFISALVRAMVAK CEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALGRSPIVGAMVAFAASSAGFNA CCHHHHHHHHHHHCCCCCHHCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC SLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSLVLALIITAVTELFVKNRA EEEHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSGEIRALTIAGVAFIGMLAVY HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH FALLFVPASPFYSEESAMSSPLVKAVTVPISLMFLGLGVVYGITIKSITSLGDIPAFMAK HHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELLQRWDLPVYVLFAAVVLAVALL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRIGDSPTNIITPMSPYFALALTFL HHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH QCYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYALGIPLGLGTPMHFQQG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure STTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSWIGSAIGMTAVNPQDG CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC STVEVTNLLTKEGATKMVSEAVNNFVAFPPLGVIITVMLGVSVAEHSGFISALVRAMVAK CEEHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALGRSPIVGAMVAFAASSAGFNA CCHHHHHHHHHHHCCCCCHHCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC SLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSLVLALIITAVTELFVKNRA EEEHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSGEIRALTIAGVAFIGMLAVY HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH FALLFVPASPFYSEESAMSSPLVKAVTVPISLMFLGLGVVYGITIKSITSLGDIPAFMAK HHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELLQRWDLPVYVLFAAVVLAVALL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRIGDSPTNIITPMSPYFALALTFL HHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH QCYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYALGIPLGLGTPMHFQQG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]