| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233342
Identifier: 38233342
GI number: 38233342
Start: 712417
End: 713427
Strand: Reverse
Name: 38233342
Synonym: DIP0736
Alternate gene names: NA
Gene position: 713427-712417 (Counterclockwise)
Preceding gene: 38233343
Following gene: 38233341
Centisome position: 28.67
GC content: 59.55
Gene sequence:
>1011_bases GTGAAGAAAACATCTTTTTCCATCGCAGCACTTGTTAGCAGCACCCTGCTTCTATCTGCCGCCCCGGCTCTTGCATTGGA ATTCGGTGAACCCGCACCTGCAAATGCTGAAAGCAGTTCTGTGGCCGCGCTGAAGATTGGCAAAGTCGGCAATTTCGGTG ACTGCACCGGAACGCTGGTTGCAGATCAGTGGGTGCTCACTGCACGCCACTGCTTGGAGTCTGTGAACAACGAAGGGACC CAGGCCCGCATCGGCGGGAAGGTCTACGATGCCGATTCTTGGGCACTGTCTCCAGTGTCCGATGCAGGATTACTTCACTT GACCGAGAAGGTCACTGACGCAACCCCTGCGAAAGTCTCCCGCGATATCCCCACACCTGGGCAGACGGGAACTCTTTACG GCTGGAGCAGCAGCTCGTCCCTAGCACGCTCCGGGCAGCTTCCGATGGCCAAGATGGTCGTCAAGGAACTGTTGGGCGGA GGCCCCTCTCAAGGAACCCCTAGTGAGGGCGCGCCTGGAGGAGCTACTCCAGGTGAGGTCGCGCCTGGAGGCGCTGCTCC AAGTGAGACTGTTCCGAGTGAATCCCAAGCCGAGTCAATCCCTGCTGGAACCGAAAGCATCCCAGCCGACGGAGCCATGA TGCCAATGATTCAAAGCGCCATCTTGGACGCACATTCCGTCTCTGGTGCAGGTATGCAGGGCGGCGACTCCGGTGGCCCA TTCTTCGTCGATGGAAAGCTCGCCGGGCTTGCTACCGCCGGAACTGCCAATGGCGACCCTGACCTGCCCTCCCCCAGCGC GGCAATCACTACCCTCGCAGGCACCGCCGACTGGATTGACGGTGTCACCTCTGGTCGCGACACAAAAAGCGTCCTAACCG CAGAGAACACTCCTGCTCCACCAAAGACCATTCAGACCAGCGCCGATCACATGTGGGGTTACCTCGCCATCGCGTGCGTT GGCCTAGTTGCCGCAGCAGCTTGGTCGCGCATTAGGAATGGCCGACAGTAA
Upstream 100 bases:
>100_bases TCGCAAATCTCTGGAAGAAGTTTGTGGGACAGGGCCCTGCTGAAAAGCTCGTTGCCACCGCGATCAAGGCCATTGTTCCT TCTGGGAAAGGGAAATAACC
Downstream 100 bases:
>100_bases AACCGTCTAACCACAACCACAAGCCGCCTCCCCAGCAAGTACCGGGTAGGCGGCTTTTATCGTGCATGCGAGGAACTTAA TCGTGACTGAAGCCACAAAA
Product: putative protease
Products: NA
Alternate protein names: Peptidase S1 And S6 Chymotrypsin/Hap
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALKIGKVGNFGDCTGTLVADQWVLTARHCLESVNNEGT QARIGGKVYDADSWALSPVSDAGLLHLTEKVTDATPAKVSRDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGG GPSQGTPSEGAPGGATPGEVAPGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAILDAHSVSGAGMQGGDSGGP FFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDGVTSGRDTKSVLTAENTPAPPKTIQTSADHMWGYLAIACV GLVAAAAWSRIRNGRQ
Sequences:
>Translated_336_residues MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALKIGKVGNFGDCTGTLVADQWVLTARHCLESVNNEGT QARIGGKVYDADSWALSPVSDAGLLHLTEKVTDATPAKVSRDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGG GPSQGTPSEGAPGGATPGEVAPGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAILDAHSVSGAGMQGGDSGGP FFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDGVTSGRDTKSVLTAENTPAPPKTIQTSADHMWGYLAIACV GLVAAAAWSRIRNGRQ >Mature_336_residues MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALKIGKVGNFGDCTGTLVADQWVLTARHCLESVNNEGT QARIGGKVYDADSWALSPVSDAGLLHLTEKVTDATPAKVSRDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGG GPSQGTPSEGAPGGATPGEVAPGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAILDAHSVSGAGMQGGDSGGP FFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDGVTSGRDTKSVLTAENTPAPPKTIQTSADHMWGYLAIACV GLVAAAAWSRIRNGRQ
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33595; Mature: 33595
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALKIGKVGNFGDCTGTLV CCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH ADQWVLTARHCLESVNNEGTQARIGGKVYDADSWALSPVSDAGLLHLTEKVTDATPAKVS HHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHC RDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGGGPSQGTPSEGAPGGATPGEV CCCCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAILDAHSVSGAGMQGGDSGGP CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDGVTSGRDTKSVLTAENTPAP EEECCCEECEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHEEECCCCCCC PKTIQTSADHMWGYLAIACVGLVAAAAWSRIRNGRQ CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALKIGKVGNFGDCTGTLV CCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH ADQWVLTARHCLESVNNEGTQARIGGKVYDADSWALSPVSDAGLLHLTEKVTDATPAKVS HHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHC RDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGGGPSQGTPSEGAPGGATPGEV CCCCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAILDAHSVSGAGMQGGDSGGP CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDGVTSGRDTKSVLTAENTPAP EEECCCEECEEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHEEECCCCCCC PKTIQTSADHMWGYLAIACVGLVAAAAWSRIRNGRQ CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA